Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.02□□□□□ -1.45
CLRN1P58418 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.02□□□□□ -1.45
CLRN1P58418 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLRN1P58418 AC020658.2-201ENST00000559030 4020 ntBASIC6.02□□□□□ -1.45
CLRN1P58418 DZANK1-203ENST00000357236 3739 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CLRN1P58418 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
CLRN1P58418 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLRN1P58418 AC096992.2-201ENST00000609553 1684 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CLRN1P58418 AC105114.1-201ENST00000624795 1862 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLRN1P58418 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLRN1P58418 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLRN1P58418 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLRN1P58418 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLRN1P58418 RPL24P4-201ENST00000326586 421 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLRN1P58418 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLRN1P58418 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLRN1P58418 RNU5B-1-201ENST00000363286 116 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 SNORD56.4-201ENST00000363883 71 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLRN1P58418 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC6.01□□□□□ -1.45
CLRN1P58418 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLRN1P58418 AL138479.1-201ENST00000426913 484 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 UBE2V1P1-201ENST00000430836 445 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.01□□□□□ -1.45
CLRN1P58418 AL590128.1-201ENST00000433407 286 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.01□□□□□ -1.45
CLRN1P58418 AC000041.1-201ENST00000439655 175 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC6.01□□□□□ -1.45
CLRN1P58418 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.01□□□□□ -1.45
CLRN1P58418 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.01□□□□□ -1.45
CLRN1P58418 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.01□□□□□ -1.45
CLRN1P58418 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.01□□□□□ -1.45
CLRN1P58418 RSL24D1P3-201ENST00000449255 495 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.01□□□□□ -1.45
CLRN1P58418 PTGES3P5-201ENST00000455109 434 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.01□□□□□ -1.45
CLRN1P58418 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.01□□□□□ -1.45
CLRN1P58418 RPSAP39-201ENST00000467439 883 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.01□□□□□ -1.45
CLRN1P58418 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.01□□□□□ -1.45
CLRN1P58418 AC021146.7-201ENST00000509604 775 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 AC017007.1-201ENST00000511960 415 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 CARSP2-201ENST00000520688 277 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 AC103855.4-201ENST00000533158 265 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLRN1P58418 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.01□□□□□ -1.45
CLRN1P58418 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.01□□□□□ -1.45
CLRN1P58418 AL442163.2-201ENST00000553912 710 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.01□□□□□ -1.45
CLRN1P58418 AGGF1P6-201ENST00000569213 976 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 RN7SL270P-201ENST00000579643 281 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 FCGR1CP-201ENST00000579737 1127 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 BMS1P7-201ENST00000602440 1052 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 AC245407.2-201ENST00000614199 451 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.01□□□□□ -1.45
CLRN1P58418 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.01□□□□□ -1.45
CLRN1P58418 AC007114.2-201ENST00000576014 4281 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 HSPD1P11-201ENST00000508643 1702 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLRN1P58418 TRIM53CP-201ENST00000531490 1354 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLRN1P58418 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLRN1P58418 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLRN1P58418 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLRN1P58418 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CLRN1P58418 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLRN1P58418 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLRN1P58418 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLRN1P58418 ZNF806-201ENST00000438300 1774 ntBASIC6.01□□□□□ -1.45
CLRN1P58418 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLRN1P58418 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6□□□□□ -1.45
CLRN1P58418 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6□□□□□ -1.45
CLRN1P58418 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6□□□□□ -1.45
CLRN1P58418 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 AC010132.2-201ENST00000295493 1043 ntBASIC6□□□□□ -1.45
CLRN1P58418 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6□□□□□ -1.45
CLRN1P58418 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6□□□□□ -1.45
CLRN1P58418 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLRN1P58418 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6□□□□□ -1.45
CLRN1P58418 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms