Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CDH13P55290 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH13P55290 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.95□□□□□ -1.46
CDH13P55290 PTCD2P2-201ENST00000415579 1095 ntBASIC5.95□□□□□ -1.46
CDH13P55290 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH13P55290 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH13P55290 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.95□□□□□ -1.46
CDH13P55290 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH13P55290 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 AL390879.1-201ENST00000439143 386 ntBASIC5.95□□□□□ -1.46
CDH13P55290 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.95□□□□□ -1.46
CDH13P55290 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.95□□□□□ -1.46
CDH13P55290 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.95□□□□□ -1.46
CDH13P55290 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.95□□□□□ -1.46
CDH13P55290 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.95□□□□□ -1.46
CDH13P55290 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.95□□□□□ -1.46
CDH13P55290 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.95□□□□□ -1.46
CDH13P55290 AC011416.1-201ENST00000514947 1732 ntBASIC5.95□□□□□ -1.46
CDH13P55290 MTND2P17-201ENST00000550281 688 ntBASIC5.95□□□□□ -1.46
CDH13P55290 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.95□□□□□ -1.46
CDH13P55290 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 CCDC58P1-201ENST00000578567 430 ntBASIC5.95□□□□□ -1.46
CDH13P55290 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.95□□□□□ -1.46
CDH13P55290 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 AL356752.1-201ENST00000615844 593 ntBASIC5.95□□□□□ -1.46
CDH13P55290 AC107308.1-201ENST00000615897 301 ntBASIC5.95□□□□□ -1.46
CDH13P55290 AL122023.1-201ENST00000622847 530 ntBASIC5.95□□□□□ -1.46
CDH13P55290 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 AC024651.2-201ENST00000562480 2098 ntBASIC5.95□□□□□ -1.46
CDH13P55290 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH13P55290 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH13P55290 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH13P55290 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH13P55290 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH13P55290 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH13P55290 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH13P55290 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CDH13P55290 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH13P55290 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CDH13P55290 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH13P55290 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.94□□□□□ -1.46
CDH13P55290 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.94□□□□□ -1.46
CDH13P55290 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH13P55290 AL022324.2-201ENST00000434827 780 ntBASIC5.94□□□□□ -1.46
CDH13P55290 ARMC4P1-201ENST00000438905 707 ntBASIC5.94□□□□□ -1.46
CDH13P55290 PA2G4P1-201ENST00000442248 1197 ntBASIC5.94□□□□□ -1.46
CDH13P55290 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.94□□□□□ -1.46
CDH13P55290 RAD1P2-201ENST00000446414 663 ntBASIC5.94□□□□□ -1.46
CDH13P55290 RPL23AP60-201ENST00000450011 454 ntBASIC5.94□□□□□ -1.46
CDH13P55290 AL445991.1-201ENST00000450381 475 ntBASIC5.94□□□□□ -1.46
CDH13P55290 AL162739.1-201ENST00000450606 307 ntBASIC5.94□□□□□ -1.46
CDH13P55290 RBMY2HP-201ENST00000457961 720 ntBASIC5.94□□□□□ -1.46
CDH13P55290 AC104849.1-201ENST00000462623 405 ntBASIC5.94□□□□□ -1.46
CDH13P55290 RPL34P33-201ENST00000486062 334 ntBASIC5.94□□□□□ -1.46
CDH13P55290 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH13P55290 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH13P55290 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH13P55290 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH13P55290 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CDH13P55290 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 NPM1P5-201ENST00000557228 838 ntBASIC5.94□□□□□ -1.46
CDH13P55290 HMGN1P26-201ENST00000558737 303 ntBASIC5.94□□□□□ -1.46
CDH13P55290 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH13P55290 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH13P55290 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.94□□□□□ -1.46
CDH13P55290 AC012368.3-201ENST00000604190 219 ntBASIC5.94□□□□□ -1.46
CDH13P55290 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH13P55290 AL136097.3-201ENST00000611097 505 ntBASIC5.94□□□□□ -1.46
CDH13P55290 AL031658.2-201ENST00000616850 651 ntBASIC5.94□□□□□ -1.46
CDH13P55290 MIR6811-201ENST00000620409 58 ntBASIC5.94□□□□□ -1.46
CDH13P55290 AC089999.3-201ENST00000622440 577 ntBASIC5.94□□□□□ -1.46
CDH13P55290 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH13P55290 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH13P55290 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH13P55290 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms