Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH8P55286 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.5□□□□□ -1.37
CDH8P55286 ATP5LP2-201ENST00000440646 311 ntBASIC6.5□□□□□ -1.37
CDH8P55286 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH8P55286 HMGN1P2-201ENST00000445197 310 ntBASIC6.5□□□□□ -1.37
CDH8P55286 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH8P55286 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.5□□□□□ -1.37
CDH8P55286 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.5□□□□□ -1.37
CDH8P55286 CCNHP1-201ENST00000513311 678 ntBASIC6.5□□□□□ -1.37
CDH8P55286 RNA5SP340-201ENST00000517132 107 ntBASIC6.5□□□□□ -1.37
CDH8P55286 TPM3P3-201ENST00000521343 354 ntBASIC6.5□□□□□ -1.37
CDH8P55286 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.5□□□□□ -1.37
CDH8P55286 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH8P55286 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.5□□□□□ -1.37
CDH8P55286 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.5□□□□□ -1.37
CDH8P55286 AC005726.4-201ENST00000582858 458 ntBASIC6.5□□□□□ -1.37
CDH8P55286 AC096861.1-201ENST00000616652 240 ntBASIC6.5□□□□□ -1.37
CDH8P55286 AL357562.1-201ENST00000624911 609 ntBASIC6.5□□□□□ -1.37
CDH8P55286 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH8P55286 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CDH8P55286 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH8P55286 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDH8P55286 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDH8P55286 QRSL1P1-201ENST00000400977 1540 ntBASIC6.5□□□□□ -1.37
CDH8P55286 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH8P55286 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH8P55286 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH8P55286 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
CDH8P55286 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH8P55286 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH8P55286 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH8P55286 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CDH8P55286 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH8P55286 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CDH8P55286 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH8P55286 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH8P55286 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH8P55286 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH8P55286 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH8P55286 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH8P55286 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH8P55286 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH8P55286 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH8P55286 AL096711.1-201ENST00000404780 554 ntBASIC6.49□□□□□ -1.37
CDH8P55286 RN7SKP151-201ENST00000410230 316 ntBASIC6.49□□□□□ -1.37
CDH8P55286 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH8P55286 RPS7P8-201ENST00000418311 581 ntBASIC6.49□□□□□ -1.37
CDH8P55286 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH8P55286 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH8P55286 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH8P55286 AC079922.1-201ENST00000443291 359 ntBASIC6.49□□□□□ -1.37
CDH8P55286 RPL6P30-201ENST00000443382 862 ntBASIC6.49□□□□□ -1.37
CDH8P55286 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH8P55286 AC023194.2-201ENST00000465398 406 ntBASIC6.49□□□□□ -1.37
CDH8P55286 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH8P55286 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH8P55286 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH8P55286 HNRNPRP2-201ENST00000528421 743 ntBASIC6.49□□□□□ -1.37
CDH8P55286 AC079905.1-201ENST00000549280 475 ntBASIC6.49□□□□□ -1.37
CDH8P55286 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH8P55286 CYCSP38-201ENST00000559840 322 ntBASIC6.49□□□□□ -1.37
CDH8P55286 AC090826.1-203ENST00000569235 490 ntBASIC6.49□□□□□ -1.37
CDH8P55286 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.49□□□□□ -1.37
CDH8P55286 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH8P55286 AP005119.1-201ENST00000580956 292 ntBASIC6.49□□□□□ -1.37
CDH8P55286 AP000919.1-201ENST00000582850 985 ntBASIC6.49□□□□□ -1.37
CDH8P55286 AC008507.3-201ENST00000585753 472 ntBASIC6.49□□□□□ -1.37
CDH8P55286 AC096586.2-201ENST00000610260 441 ntBASIC6.49□□□□□ -1.37
CDH8P55286 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH8P55286 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH8P55286 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH8P55286 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH8P55286 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH8P55286 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH8P55286 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CDH8P55286 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH8P55286 MTCO1P28-201ENST00000574177 1528 ntBASIC6.49□□□□□ -1.37
CDH8P55286 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CDH8P55286 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CDH8P55286 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CDH8P55286 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CDH8P55286 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.49□□□□□ -1.37
CDH8P55286 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.49□□□□□ -1.37
CDH8P55286 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH8P55286 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH8P55286 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
CDH8P55286 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
CDH8P55286 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH8P55286 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH8P55286 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH8P55286 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CDH8P55286 RNFT1P3-201ENST00000340898 1052 ntBASIC6.48□□□□□ -1.37
CDH8P55286 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDH8P55286 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.48□□□□□ -1.37
CDH8P55286 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDH8P55286 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.48□□□□□ -1.37
CDH8P55286 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.48□□□□□ -1.37
CDH8P55286 HMGB1P32-201ENST00000425971 565 ntBASIC6.48□□□□□ -1.37
CDH8P55286 AC144530.1-201ENST00000452862 555 ntBASIC6.48□□□□□ -1.37
CDH8P55286 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms