Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH4P55283 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.19□□□□□ -1.42
CDH4P55283 AC139426.3-201ENST00000605648 2059 ntBASIC6.19□□□□□ -1.42
CDH4P55283 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH4P55283 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH4P55283 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH4P55283 AC012254.3-201ENST00000591183 2117 ntBASIC6.19□□□□□ -1.42
CDH4P55283 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH4P55283 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH4P55283 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH4P55283 RNFT1P3-201ENST00000340898 1052 ntBASIC6.19□□□□□ -1.42
CDH4P55283 RNU4-64P-201ENST00000410795 131 ntBASIC6.19□□□□□ -1.42
CDH4P55283 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH4P55283 AC245884.2-201ENST00000426257 404 ntBASIC6.19□□□□□ -1.42
CDH4P55283 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH4P55283 GAPDHP75-201ENST00000433910 943 ntBASIC6.19□□□□□ -1.42
CDH4P55283 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH4P55283 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH4P55283 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH4P55283 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH4P55283 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH4P55283 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.19□□□□□ -1.42
CDH4P55283 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH4P55283 SCARNA18.1-201ENST00000516330 83 ntBASIC6.19□□□□□ -1.42
CDH4P55283 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.19□□□□□ -1.42
CDH4P55283 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH4P55283 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH4P55283 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH4P55283 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH4P55283 AC007494.1-201ENST00000562293 760 ntBASIC6.19□□□□□ -1.42
CDH4P55283 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH4P55283 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH4P55283 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH4P55283 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH4P55283 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.19□□□□□ -1.42
CDH4P55283 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CDH4P55283 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH4P55283 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH4P55283 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH4P55283 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH4P55283 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.19□□□□□ -1.42
CDH4P55283 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CDH4P55283 AC099654.3-201ENST00000447087 1546 ntBASIC6.19□□□□□ -1.42
CDH4P55283 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH4P55283 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CDH4P55283 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH4P55283 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH4P55283 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH4P55283 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH4P55283 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH4P55283 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
CDH4P55283 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CDH4P55283 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH4P55283 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CDH4P55283 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH4P55283 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH4P55283 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH4P55283 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH4P55283 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CDH4P55283 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CDH4P55283 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH4P55283 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CDH4P55283 AL360271.1-201ENST00000395679 510 ntBASIC6.18□□□□□ -1.42
CDH4P55283 AL096711.1-201ENST00000404780 554 ntBASIC6.18□□□□□ -1.42
CDH4P55283 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH4P55283 RPL35AP3-201ENST00000414680 288 ntBASIC6.18□□□□□ -1.42
CDH4P55283 NMD3P2-201ENST00000421815 761 ntBASIC6.18□□□□□ -1.42
CDH4P55283 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH4P55283 AC016027.5-201ENST00000427227 210 ntBASIC6.18□□□□□ -1.42
CDH4P55283 AC002069.1-201ENST00000429649 1159 ntBASIC6.18□□□□□ -1.42
CDH4P55283 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH4P55283 DNAJA1P5-201ENST00000440278 943 ntBASIC6.18□□□□□ -1.42
CDH4P55283 AL359839.1-201ENST00000451975 1160 ntBASIC6.18□□□□□ -1.42
CDH4P55283 AC023245.1-201ENST00000468501 517 ntBASIC6.18□□□□□ -1.42
CDH4P55283 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH4P55283 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH4P55283 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.18□□□□□ -1.42
CDH4P55283 CCDC11P1-201ENST00000503137 1162 ntBASIC6.18□□□□□ -1.42
CDH4P55283 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH4P55283 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH4P55283 TRIM77BP-201ENST00000524985 1119 ntBASIC6.18□□□□□ -1.42
CDH4P55283 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.18□□□□□ -1.42
CDH4P55283 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH4P55283 NDUFA5P11-201ENST00000567995 343 ntBASIC6.18□□□□□ -1.42
CDH4P55283 AC005726.4-201ENST00000582858 458 ntBASIC6.18□□□□□ -1.42
CDH4P55283 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.18□□□□□ -1.42
CDH4P55283 AC067773.1-201ENST00000603284 1094 ntBASIC6.18□□□□□ -1.42
CDH4P55283 AC004890.3-201ENST00000605566 1095 ntBASIC6.18□□□□□ -1.42
CDH4P55283 AL136131.3-201ENST00000607600 188 ntBASIC6.18□□□□□ -1.42
CDH4P55283 MIR6809-201ENST00000612189 116 ntBASIC6.18□□□□□ -1.42
CDH4P55283 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH4P55283 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CDH4P55283 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH4P55283 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CDH4P55283 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.18□□□□□ -1.42
CDH4P55283 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH4P55283 MAPK10-261ENST00000641050 3109 ntBASIC6.18□□□□□ -1.42
CDH4P55283 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH4P55283 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
CDH4P55283 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms