Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL352984.2-201ENST00000611153 546 ntBASIC6.67□□□□□ -1.34
VCPP55072 AL137246.2-201ENST00000613439 662 ntBASIC6.67□□□□□ -1.34
VCPP55072 FAM27E2-201ENST00000619668 403 ntBASIC6.67□□□□□ -1.34
VCPP55072 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.67□□□□□ -1.34
VCPP55072 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
VCPP55072 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VCPP55072 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VCPP55072 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
VCPP55072 ZNF402P-201ENST00000404435 3100 ntBASIC6.67□□□□□ -1.34
VCPP55072 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
VCPP55072 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
VCPP55072 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.67□□□□□ -1.34
VCPP55072 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VCPP55072 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VCPP55072 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.66□□□□□ -1.34
VCPP55072 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VCPP55072 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
VCPP55072 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
VCPP55072 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VCPP55072 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
VCPP55072 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VCPP55072 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VCPP55072 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.66□□□□□ -1.34
VCPP55072 RN7SKP292-201ENST00000365522 317 ntBASIC6.66□□□□□ -1.34
VCPP55072 MIR105-2-201ENST00000385083 81 ntBASIC6.66□□□□□ -1.34
VCPP55072 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VCPP55072 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.66□□□□□ -1.34
VCPP55072 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VCPP55072 AL121776.1-201ENST00000429337 372 ntBASIC6.66□□□□□ -1.34
VCPP55072 AC094019.1-201ENST00000434678 472 ntBASIC6.66□□□□□ -1.34
VCPP55072 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.66□□□□□ -1.34
VCPP55072 RPL36AP39-201ENST00000445859 318 ntBASIC6.66□□□□□ -1.34
VCPP55072 RN7SL610P-201ENST00000463845 291 ntBASIC6.66□□□□□ -1.34
VCPP55072 RPSAP39-201ENST00000467439 883 ntBASIC6.66□□□□□ -1.34
VCPP55072 RPL32P9-201ENST00000487963 407 ntBASIC6.66□□□□□ -1.34
VCPP55072 AL136038.1-201ENST00000497246 351 ntBASIC6.66□□□□□ -1.34
VCPP55072 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.66□□□□□ -1.34
VCPP55072 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.66□□□□□ -1.34
VCPP55072 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.66□□□□□ -1.34
VCPP55072 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.66□□□□□ -1.34
VCPP55072 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.66□□□□□ -1.34
VCPP55072 MIR1273E-201ENST00000581165 102 ntBASIC6.66□□□□□ -1.34
VCPP55072 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.66□□□□□ -1.34
VCPP55072 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.66□□□□□ -1.34
VCPP55072 AC073488.3-201ENST00000631611 778 ntBASIC6.66□□□□□ -1.34
VCPP55072 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VCPP55072 TTC41P-205ENST00000551270 3963 ntBASIC6.66□□□□□ -1.34
VCPP55072 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
VCPP55072 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.66□□□□□ -1.34
VCPP55072 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.66□□□□□ -1.34
VCPP55072 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
VCPP55072 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VCPP55072 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
VCPP55072 AC018717.1-201ENST00000457712 1505 ntBASIC6.66□□□□□ -1.34
VCPP55072 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VCPP55072 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.65□□□□□ -1.34
VCPP55072 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VCPP55072 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
VCPP55072 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.65□□□□□ -1.34
VCPP55072 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.65□□□□□ -1.34
VCPP55072 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
VCPP55072 AL121835.1-201ENST00000404250 354 ntBASIC6.65□□□□□ -1.34
VCPP55072 RNA5SP251-201ENST00000410614 137 ntBASIC6.65□□□□□ -1.34
VCPP55072 TMA16P2-201ENST00000413187 601 ntBASIC6.65□□□□□ -1.34
VCPP55072 CYP4F30P-202ENST00000420048 405 ntBASIC6.65□□□□□ -1.34
VCPP55072 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.65□□□□□ -1.34
VCPP55072 AL157884.1-201ENST00000424561 454 ntBASIC6.65□□□□□ -1.34
VCPP55072 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.65□□□□□ -1.34
VCPP55072 NPM1P22-201ENST00000427761 952 ntBASIC6.65□□□□□ -1.34
VCPP55072 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.65□□□□□ -1.34
VCPP55072 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.65□□□□□ -1.34
VCPP55072 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.65□□□□□ -1.34
VCPP55072 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.65□□□□□ -1.34
VCPP55072 IGKV1D-22-201ENST00000518953 324 ntBASIC6.65□□□□□ -1.34
VCPP55072 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.65□□□□□ -1.34
VCPP55072 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.65□□□□□ -1.34
VCPP55072 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.65□□□□□ -1.34
VCPP55072 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.65□□□□□ -1.34
VCPP55072 AC092332.1-201ENST00000563684 829 ntBASIC6.65□□□□□ -1.34
VCPP55072 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.65□□□□□ -1.34
VCPP55072 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.65□□□□□ -1.34
VCPP55072 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.65□□□□□ -1.34
VCPP55072 AL049840.6-201ENST00000604583 345 ntBASIC6.65□□□□□ -1.34
VCPP55072 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VCPP55072 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.65□□□□□ -1.34
VCPP55072 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VCPP55072 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
VCPP55072 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
VCPP55072 AC007159.1-201ENST00000566529 4706 ntBASIC6.65□□□□□ -1.35
VCPP55072 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
VCPP55072 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.65□□□□□ -1.35
VCPP55072 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
VCPP55072 OFD1P17-201ENST00000437639 3018 ntBASIC6.65□□□□□ -1.35
VCPP55072 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
VCPP55072 BIN2P1-201ENST00000504996 1530 ntBASIC6.65□□□□□ -1.35
VCPP55072 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.65□□□□□ -1.35
VCPP55072 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.65□□□□□ -1.35
VCPP55072 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
VCPP55072 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
VCPP55072 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms