Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.5□□□□□ -1.37
CASP4P49662 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CASP4P49662 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.5□□□□□ -1.37
CASP4P49662 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CASP4P49662 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.5□□□□□ -1.37
CASP4P49662 RNA5SP211-201ENST00000365516 117 ntBASIC6.5□□□□□ -1.37
CASP4P49662 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CASP4P49662 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.5□□□□□ -1.37
CASP4P49662 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.5□□□□□ -1.37
CASP4P49662 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.5□□□□□ -1.37
CASP4P49662 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.5□□□□□ -1.37
CASP4P49662 GAPDHP75-201ENST00000433910 943 ntBASIC6.5□□□□□ -1.37
CASP4P49662 AC110602.1-201ENST00000437414 318 ntBASIC6.5□□□□□ -1.37
CASP4P49662 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.5□□□□□ -1.37
CASP4P49662 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.5□□□□□ -1.37
CASP4P49662 AC019084.1-201ENST00000457337 432 ntBASIC6.5□□□□□ -1.37
CASP4P49662 CST12P-201ENST00000457644 362 ntBASIC6.5□□□□□ -1.37
CASP4P49662 RPL38P3-201ENST00000484463 213 ntBASIC6.5□□□□□ -1.37
CASP4P49662 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.5□□□□□ -1.37
CASP4P49662 RN7SL649P-201ENST00000496974 275 ntBASIC6.5□□□□□ -1.37
CASP4P49662 AC008629.2-201ENST00000503783 483 ntBASIC6.5□□□□□ -1.37
CASP4P49662 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.5□□□□□ -1.37
CASP4P49662 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.5□□□□□ -1.37
CASP4P49662 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.5□□□□□ -1.37
CASP4P49662 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.5□□□□□ -1.37
CASP4P49662 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC6.5□□□□□ -1.37
CASP4P49662 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.5□□□□□ -1.37
CASP4P49662 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.5□□□□□ -1.37
CASP4P49662 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.5□□□□□ -1.37
CASP4P49662 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CASP4P49662 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.5□□□□□ -1.37
CASP4P49662 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.5□□□□□ -1.37
CASP4P49662 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CASP4P49662 MIR7109-201ENST00000613748 65 ntBASIC6.5□□□□□ -1.37
CASP4P49662 AL355974.3-201ENST00000617383 467 ntBASIC6.5□□□□□ -1.37
CASP4P49662 SNX18P12-201ENST00000624821 759 ntBASIC6.5□□□□□ -1.37
CASP4P49662 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CASP4P49662 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CASP4P49662 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.5□□□□□ -1.37
CASP4P49662 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CASP4P49662 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
CASP4P49662 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
CASP4P49662 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CASP4P49662 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CASP4P49662 THAP12P9-201ENST00000503971 2360 ntBASIC6.5□□□□□ -1.37
CASP4P49662 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CASP4P49662 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.49□□□□□ -1.37
CASP4P49662 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.49□□□□□ -1.37
CASP4P49662 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.49□□□□□ -1.37
CASP4P49662 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.49□□□□□ -1.37
CASP4P49662 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CASP4P49662 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CASP4P49662 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
CASP4P49662 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.49□□□□□ -1.37
CASP4P49662 OR7E156P-201ENST00000400303 464 ntBASIC6.49□□□□□ -1.37
CASP4P49662 RPL24P2-201ENST00000421023 475 ntBASIC6.49□□□□□ -1.37
CASP4P49662 RPL6P30-201ENST00000443382 862 ntBASIC6.49□□□□□ -1.37
CASP4P49662 AC009963.3-201ENST00000458090 486 ntBASIC6.49□□□□□ -1.37
CASP4P49662 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.49□□□□□ -1.37
CASP4P49662 AC023194.2-201ENST00000465398 406 ntBASIC6.49□□□□□ -1.37
CASP4P49662 TRBV5-2-201ENST00000489095 273 ntBASIC6.49□□□□□ -1.37
CASP4P49662 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.49□□□□□ -1.37
CASP4P49662 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.49□□□□□ -1.37
CASP4P49662 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.49□□□□□ -1.37
CASP4P49662 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.49□□□□□ -1.37
CASP4P49662 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.49□□□□□ -1.37
CASP4P49662 OR4A6P-201ENST00000534364 970 ntBASIC6.49□□□□□ -1.37
CASP4P49662 AC079905.1-201ENST00000549280 475 ntBASIC6.49□□□□□ -1.37
CASP4P49662 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.49□□□□□ -1.37
CASP4P49662 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.49□□□□□ -1.37
CASP4P49662 AC002310.3-201ENST00000569728 723 ntBASIC6.49□□□□□ -1.37
CASP4P49662 AC134669.1-201ENST00000581275 672 ntBASIC6.49□□□□□ -1.37
CASP4P49662 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.49□□□□□ -1.37
CASP4P49662 AC008507.3-201ENST00000585753 472 ntBASIC6.49□□□□□ -1.37
CASP4P49662 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CASP4P49662 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.49□□□□□ -1.37
CASP4P49662 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CASP4P49662 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
CASP4P49662 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.49□□□□□ -1.37
CASP4P49662 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CASP4P49662 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.49□□□□□ -1.37
CASP4P49662 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CASP4P49662 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.49□□□□□ -1.37
CASP4P49662 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.49□□□□□ -1.37
CASP4P49662 AL359955.1-201ENST00000455242 3275 ntBASIC6.49□□□□□ -1.37
CASP4P49662 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CASP4P49662 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CASP4P49662 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CASP4P49662 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CASP4P49662 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CASP4P49662 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
CASP4P49662 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CASP4P49662 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CASP4P49662 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CASP4P49662 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
CASP4P49662 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.48□□□□□ -1.37
CASP4P49662 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.48□□□□□ -1.37
CASP4P49662 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CASP4P49662 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CASP4P49662 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms