Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 DUXAP8-207ENST00000456786 622 ntBASIC5.61□□□□□ -1.51
SOX2P48431 SLC25A51P1-201ENST00000468432 871 ntBASIC5.61□□□□□ -1.51
SOX2P48431 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SOX2P48431 AC106760.2-201ENST00000504159 619 ntBASIC5.61□□□□□ -1.51
SOX2P48431 AC096571.1-202ENST00000506634 735 ntBASIC5.61□□□□□ -1.51
SOX2P48431 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX2P48431 AC112518.2-201ENST00000508565 425 ntBASIC5.61□□□□□ -1.51
SOX2P48431 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.61□□□□□ -1.51
SOX2P48431 RNA5SP318-201ENST00000516352 92 ntBASIC5.61□□□□□ -1.51
SOX2P48431 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SOX2P48431 AP005902.2-201ENST00000518393 307 ntBASIC5.61□□□□□ -1.51
SOX2P48431 CARSP2-201ENST00000520688 277 ntBASIC5.61□□□□□ -1.51
SOX2P48431 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.61□□□□□ -1.51
SOX2P48431 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX2P48431 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.61□□□□□ -1.51
SOX2P48431 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.61□□□□□ -1.51
SOX2P48431 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX2P48431 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX2P48431 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX2P48431 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SOX2P48431 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX2P48431 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC5.61□□□□□ -1.51
SOX2P48431 GLRXP2-201ENST00000555594 321 ntBASIC5.61□□□□□ -1.51
SOX2P48431 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.61□□□□□ -1.51
SOX2P48431 AC106730.2-201ENST00000566641 540 ntBASIC5.61□□□□□ -1.51
SOX2P48431 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.61□□□□□ -1.51
SOX2P48431 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.61□□□□□ -1.51
SOX2P48431 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX2P48431 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX2P48431 KYNUP2-201ENST00000582280 1329 ntBASIC5.61□□□□□ -1.51
SOX2P48431 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SOX2P48431 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX2P48431 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX2P48431 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX2P48431 AC112220.2-201ENST00000605513 533 ntBASIC5.61□□□□□ -1.51
SOX2P48431 AC093635.1-201ENST00000609028 555 ntBASIC5.61□□□□□ -1.51
SOX2P48431 DUXAP10-204ENST00000612052 616 ntBASIC5.61□□□□□ -1.51
SOX2P48431 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.61□□□□□ -1.51
SOX2P48431 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX2P48431 AC007671.1-201ENST00000616957 830 ntBASIC5.61□□□□□ -1.51
SOX2P48431 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX2P48431 SAGE3P-201ENST00000619800 1635 ntBASIC5.61□□□□□ -1.51
SOX2P48431 AC007275.1-201ENST00000621243 671 ntBASIC5.61□□□□□ -1.51
SOX2P48431 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SOX2P48431 MIR6807-201ENST00000621968 92 ntBASIC5.61□□□□□ -1.51
SOX2P48431 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX2P48431 AL035425.4-201ENST00000624509 1063 ntBASIC5.61□□□□□ -1.51
SOX2P48431 AL137058.3-201ENST00000624531 3099 ntBASIC5.61□□□□□ -1.51
SOX2P48431 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX2P48431 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX2P48431 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX2P48431 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SOX2P48431 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.61□□□□□ -1.51
SOX2P48431 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
SOX2P48431 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SOX2P48431 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX2P48431 AC011455.2-201ENST00000599320 3336 ntBASIC5.6□□□□□ -1.51
SOX2P48431 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX2P48431 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX2P48431 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX2P48431 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 RNA5SP152-201ENST00000365184 110 ntBASIC5.6□□□□□ -1.51
SOX2P48431 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX2P48431 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SOX2P48431 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 LDHAP5-201ENST00000394996 622 ntBASIC5.6□□□□□ -1.51
SOX2P48431 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 AL590635.1-201ENST00000406314 586 ntBASIC5.6□□□□□ -1.51
SOX2P48431 CYP4F30P-202ENST00000420048 405 ntBASIC5.6□□□□□ -1.51
SOX2P48431 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 RPL23AP85-201ENST00000421838 433 ntBASIC5.6□□□□□ -1.51
SOX2P48431 AL606495.1-201ENST00000422100 813 ntBASIC5.6□□□□□ -1.51
SOX2P48431 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.6□□□□□ -1.51
SOX2P48431 AC013262.1-201ENST00000426710 252 ntBASIC5.6□□□□□ -1.51
SOX2P48431 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX2P48431 GAPDHP33-201ENST00000443168 1013 ntBASIC5.6□□□□□ -1.51
SOX2P48431 AL353803.3-201ENST00000444641 335 ntBASIC5.6□□□□□ -1.51
SOX2P48431 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.6□□□□□ -1.51
SOX2P48431 AL022237.1-201ENST00000446663 358 ntBASIC5.6□□□□□ -1.51
SOX2P48431 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.6□□□□□ -1.51
SOX2P48431 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.6□□□□□ -1.51
SOX2P48431 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.6□□□□□ -1.51
SOX2P48431 snoU109.3-201ENST00000459477 145 ntBASIC5.6□□□□□ -1.51
SOX2P48431 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SOX2P48431 RN7SL221P-201ENST00000466190 281 ntBASIC5.6□□□□□ -1.51
SOX2P48431 RPL5P15-201ENST00000475870 897 ntBASIC5.6□□□□□ -1.51
SOX2P48431 RN7SL868P-201ENST00000485915 303 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms