Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HADHAP40939 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.33□□□□□ -1.4
HADHAP40939 RN7SKP187-201ENST00000365536 330 ntBASIC6.33□□□□□ -1.4
HADHAP40939 SNORA64.3-201ENST00000365647 134 ntBASIC6.33□□□□□ -1.4
HADHAP40939 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.33□□□□□ -1.4
HADHAP40939 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HADHAP40939 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HADHAP40939 AL121835.1-201ENST00000404250 354 ntBASIC6.33□□□□□ -1.4
HADHAP40939 OR2W4P-201ENST00000406496 926 ntBASIC6.33□□□□□ -1.4
HADHAP40939 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.33□□□□□ -1.4
HADHAP40939 AL359885.1-201ENST00000415786 903 ntBASIC6.33□□□□□ -1.4
HADHAP40939 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.33□□□□□ -1.4
HADHAP40939 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
HADHAP40939 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.33□□□□□ -1.4
HADHAP40939 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.33□□□□□ -1.4
HADHAP40939 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.33□□□□□ -1.4
HADHAP40939 OR2L9P-201ENST00000444456 913 ntBASIC6.33□□□□□ -1.4
HADHAP40939 POU5F1P5-201ENST00000445059 658 ntBASIC6.33□□□□□ -1.4
HADHAP40939 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.33□□□□□ -1.4
HADHAP40939 AC234771.2-201ENST00000445718 597 ntBASIC6.33□□□□□ -1.4
HADHAP40939 TIMM8BP2-201ENST00000445940 251 ntBASIC6.33□□□□□ -1.4
HADHAP40939 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.33□□□□□ -1.4
HADHAP40939 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.33□□□□□ -1.4
HADHAP40939 RN7SL369P-201ENST00000477138 299 ntBASIC6.33□□□□□ -1.4
HADHAP40939 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.33□□□□□ -1.4
HADHAP40939 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
HADHAP40939 GM2AP2-201ENST00000491764 562 ntBASIC6.33□□□□□ -1.4
HADHAP40939 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.33□□□□□ -1.4
HADHAP40939 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.33□□□□□ -1.4
HADHAP40939 KHDC1P1-201ENST00000511053 508 ntBASIC6.33□□□□□ -1.4
HADHAP40939 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.33□□□□□ -1.4
HADHAP40939 SNORA70.17-201ENST00000516449 133 ntBASIC6.33□□□□□ -1.4
HADHAP40939 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.33□□□□□ -1.4
HADHAP40939 AC121758.1-202ENST00000556917 658 ntBASIC6.33□□□□□ -1.4
HADHAP40939 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.33□□□□□ -1.4
HADHAP40939 MIR3189-201ENST00000578735 73 ntBASIC6.33□□□□□ -1.4
HADHAP40939 AC005332.4-201ENST00000592752 579 ntBASIC6.33□□□□□ -1.4
HADHAP40939 AC245128.3-201ENST00000594721 748 ntBASIC6.33□□□□□ -1.4
HADHAP40939 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.33□□□□□ -1.4
HADHAP40939 MAPK10-350ENST00000641777 965 ntBASIC6.33□□□□□ -1.4
HADHAP40939 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HADHAP40939 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HADHAP40939 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HADHAP40939 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.33□□□□□ -1.4
HADHAP40939 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HADHAP40939 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.33□□□□□ -1.4
HADHAP40939 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.33□□□□□ -1.4
HADHAP40939 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HADHAP40939 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HADHAP40939 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
HADHAP40939 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
HADHAP40939 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HADHAP40939 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HADHAP40939 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.32□□□□□ -1.4
HADHAP40939 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.32□□□□□ -1.4
HADHAP40939 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HADHAP40939 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
HADHAP40939 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HADHAP40939 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HADHAP40939 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HADHAP40939 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.32□□□□□ -1.4
HADHAP40939 AC090181.3-201ENST00000624777 1514 ntBASIC6.32□□□□□ -1.4
HADHAP40939 GUCY1B2-204ENST00000531898 1979 ntBASIC6.32□□□□□ -1.4
HADHAP40939 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HADHAP40939 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
HADHAP40939 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HADHAP40939 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
HADHAP40939 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HADHAP40939 AC107977.1-201ENST00000355745 939 ntBASIC6.32□□□□□ -1.4
HADHAP40939 RNU6-1331P-201ENST00000363658 106 ntBASIC6.32□□□□□ -1.4
HADHAP40939 RNU6-819P-201ENST00000364116 107 ntBASIC6.32□□□□□ -1.4
HADHAP40939 MIR433-201ENST00000384837 93 ntBASIC6.32□□□□□ -1.4
HADHAP40939 NPM1P10-201ENST00000398310 865 ntBASIC6.32□□□□□ -1.4
HADHAP40939 RN7SKP151-201ENST00000410230 316 ntBASIC6.32□□□□□ -1.4
HADHAP40939 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.32□□□□□ -1.4
HADHAP40939 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HADHAP40939 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.32□□□□□ -1.4
HADHAP40939 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.32□□□□□ -1.4
HADHAP40939 XKRYP6-201ENST00000440468 1116 ntBASIC6.32□□□□□ -1.4
HADHAP40939 XKRYP3-201ENST00000442113 1116 ntBASIC6.32□□□□□ -1.4
HADHAP40939 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.32□□□□□ -1.4
HADHAP40939 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.32□□□□□ -1.4
HADHAP40939 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.32□□□□□ -1.4
HADHAP40939 RPL29P23-201ENST00000486188 442 ntBASIC6.32□□□□□ -1.4
HADHAP40939 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
HADHAP40939 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC6.32□□□□□ -1.4
HADHAP40939 CYP4F27P-201ENST00000514557 494 ntBASIC6.32□□□□□ -1.4
HADHAP40939 AC117525.1-201ENST00000515228 503 ntBASIC6.32□□□□□ -1.4
HADHAP40939 SNORA74.1-201ENST00000516320 180 ntBASIC6.32□□□□□ -1.4
HADHAP40939 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.32□□□□□ -1.4
HADHAP40939 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.32□□□□□ -1.4
HADHAP40939 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.32□□□□□ -1.4
HADHAP40939 OR4A41P-201ENST00000533053 928 ntBASIC6.32□□□□□ -1.4
HADHAP40939 AC023310.2-201ENST00000553844 547 ntBASIC6.32□□□□□ -1.4
HADHAP40939 RN7SL230P-201ENST00000580835 303 ntBASIC6.32□□□□□ -1.4
HADHAP40939 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.32□□□□□ -1.4
HADHAP40939 AL589765.6-201ENST00000601909 549 ntBASIC6.32□□□□□ -1.4
HADHAP40939 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.32□□□□□ -1.4
HADHAP40939 AC011891.2-201ENST00000604949 397 ntBASIC6.32□□□□□ -1.4
HADHAP40939 GMCL1P2-201ENST00000605230 823 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 1225.2 ms