Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PTPN6P29350 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN6P29350 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN6P29350 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PTPN6P29350 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN6P29350 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
PTPN6P29350 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PTPN6P29350 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.81□□□□□ -1.48
PTPN6P29350 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN6P29350 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PTPN6P29350 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PTPN6P29350 AL157702.1-201ENST00000398764 426 ntBASIC5.81□□□□□ -1.48
PTPN6P29350 RPL7P58-201ENST00000402913 758 ntBASIC5.81□□□□□ -1.48
PTPN6P29350 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN6P29350 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN6P29350 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN6P29350 AC099782.1-201ENST00000425889 474 ntBASIC5.81□□□□□ -1.48
PTPN6P29350 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN6P29350 SOCS5P1-201ENST00000440415 949 ntBASIC5.81□□□□□ -1.48
PTPN6P29350 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PTPN6P29350 EEF1B2P3-201ENST00000447718 678 ntBASIC5.81□□□□□ -1.48
PTPN6P29350 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN6P29350 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN6P29350 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.81□□□□□ -1.48
PTPN6P29350 AC090142.2-201ENST00000483263 416 ntBASIC5.81□□□□□ -1.48
PTPN6P29350 RN7SL362P-201ENST00000494228 267 ntBASIC5.81□□□□□ -1.48
PTPN6P29350 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN6P29350 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN6P29350 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN6P29350 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN6P29350 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN6P29350 AP003080.1-202ENST00000526526 915 ntBASIC5.81□□□□□ -1.48
PTPN6P29350 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN6P29350 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN6P29350 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN6P29350 HNRNPCP1-201ENST00000556181 766 ntBASIC5.81□□□□□ -1.48
PTPN6P29350 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.81□□□□□ -1.48
PTPN6P29350 OR1E3-201ENST00000575608 948 ntBASIC5.81□□□□□ -1.48
PTPN6P29350 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN6P29350 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN6P29350 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN6P29350 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN6P29350 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.81□□□□□ -1.48
PTPN6P29350 AC111152.1-202ENST00000635848 339 ntBASIC5.81□□□□□ -1.48
PTPN6P29350 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.81□□□□□ -1.48
PTPN6P29350 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PTPN6P29350 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
PTPN6P29350 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN6P29350 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.81□□□□□ -1.48
PTPN6P29350 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PTPN6P29350 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.81□□□□□ -1.48
PTPN6P29350 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTPN6P29350 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN6P29350 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN6P29350 SAMMSON-210ENST00000641260 1308 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN6P29350 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
PTPN6P29350 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN6P29350 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN6P29350 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN6P29350 RNA5SP232-201ENST00000364144 119 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 RNU6-167P-201ENST00000384292 106 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 MIR188-201ENST00000385034 86 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN6P29350 MTND2P12-201ENST00000417560 1252 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN6P29350 POU5F1P5-201ENST00000445059 658 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPN6P29350 snoU13.29-201ENST00000459370 104 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 OR7E22P-201ENST00000478335 1035 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 AC112484.3-201ENST00000505910 329 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN6P29350 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPN6P29350 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN6P29350 RNA5SP206-201ENST00000516703 121 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN6P29350 BCAS2P1-201ENST00000528022 632 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN6P29350 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN6P29350 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPN6P29350 AL078601.3-201ENST00000573303 535 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.8□□□□□ -1.48
PTPN6P29350 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN6P29350 MIR7109-201ENST00000613748 65 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN6P29350 MIR6806-201ENST00000622141 64 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPN6P29350 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN6P29350 AL121839.2-201ENST00000565058 6943 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PTPN6P29350 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
PTPN6P29350 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.8□□□□□ -1.48
PTPN6P29350 CAP1P2-201ENST00000417455 1409 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 AC024587.1-201ENST00000505925 2157 ntBASIC5.8□□□□□ -1.48
PTPN6P29350 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN6P29350 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN6P29350 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN6P29350 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.8□□□□□ -1.48
PTPN6P29350 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTPN6P29350 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms