Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC138207.8-204ENST00000579588 527 ntBASIC5.92□□□□□ -1.46
ABCD3P28288 FAM106CP-201ENST00000582212 507 ntBASIC5.92□□□□□ -1.46
ABCD3P28288 MTCO2P22-201ENST00000603246 681 ntBASIC5.92□□□□□ -1.46
ABCD3P28288 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
ABCD3P28288 AC012254.5-201ENST00000623573 478 ntBASIC5.92□□□□□ -1.46
ABCD3P28288 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
ABCD3P28288 PROS2P-201ENST00000474651 1951 ntBASIC5.92□□□□□ -1.46
ABCD3P28288 TMCC1P1-201ENST00000518897 1980 ntBASIC5.92□□□□□ -1.46
ABCD3P28288 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ABCD3P28288 AC132825.1-201ENST00000463573 2247 ntBASIC5.92□□□□□ -1.46
ABCD3P28288 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ABCD3P28288 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.92□□□□□ -1.46
ABCD3P28288 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ABCD3P28288 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
ABCD3P28288 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ABCD3P28288 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.92□□□□□ -1.46
ABCD3P28288 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ABCD3P28288 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ABCD3P28288 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
ABCD3P28288 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ABCD3P28288 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ABCD3P28288 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
ABCD3P28288 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
ABCD3P28288 AC005618.1-201ENST00000606901 3148 ntBASIC5.92□□□□□ -1.46
ABCD3P28288 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.92□□□□□ -1.46
ABCD3P28288 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
ABCD3P28288 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
ABCD3P28288 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ABCD3P28288 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ABCD3P28288 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ABCD3P28288 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
ABCD3P28288 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ABCD3P28288 AC068446.1-201ENST00000556425 1549 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ABCD3P28288 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.91□□□□□ -1.46
ABCD3P28288 RNU6-1263P-201ENST00000384601 106 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 SNORA40.4-201ENST00000390971 128 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 AC003045.1-201ENST00000398779 713 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ABCD3P28288 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.91□□□□□ -1.46
ABCD3P28288 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.91□□□□□ -1.46
ABCD3P28288 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.91□□□□□ -1.46
ABCD3P28288 MTCYBP7-201ENST00000419540 1134 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 AC073464.3-201ENST00000422564 712 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 MTND4P24-201ENST00000424002 397 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 AC096632.2-201ENST00000438139 1239 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.91□□□□□ -1.46
ABCD3P28288 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.91□□□□□ -1.46
ABCD3P28288 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.91□□□□□ -1.46
ABCD3P28288 CCNJP2-201ENST00000457810 1163 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 RPL29P23-201ENST00000486188 442 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 GM2AP2-201ENST00000491764 562 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 OR9N1P-202ENST00000494289 481 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.91□□□□□ -1.46
ABCD3P28288 AC106800.3-201ENST00000511389 308 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.91□□□□□ -1.46
ABCD3P28288 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.91□□□□□ -1.46
ABCD3P28288 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.91□□□□□ -1.46
ABCD3P28288 CYCSP25-201ENST00000525280 316 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 AC134349.2-201ENST00000535136 910 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.91□□□□□ -1.46
ABCD3P28288 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.91□□□□□ -1.46
ABCD3P28288 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.91□□□□□ -1.46
ABCD3P28288 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.91□□□□□ -1.46
ABCD3P28288 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.91□□□□□ -1.46
ABCD3P28288 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.91□□□□□ -1.46
ABCD3P28288 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.91□□□□□ -1.46
ABCD3P28288 MIR3908-201ENST00000579798 126 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 WBP1LP12-201ENST00000604449 331 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 AL356608.1-201ENST00000610034 820 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.91□□□□□ -1.46
ABCD3P28288 CR589904.2-201ENST00000612533 440 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 AC073575.2-201ENST00000614212 627 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 AC021422.1-201ENST00000621212 473 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 AC092159.4-201ENST00000624944 550 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.91□□□□□ -1.46
ABCD3P28288 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.91□□□□□ -1.46
ABCD3P28288 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
ABCD3P28288 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.91□□□□□ -1.46
ABCD3P28288 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
ABCD3P28288 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ABCD3P28288 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
ABCD3P28288 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ABCD3P28288 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ABCD3P28288 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
ABCD3P28288 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ABCD3P28288 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ABCD3P28288 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ABCD3P28288 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ABCD3P28288 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ABCD3P28288 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.9□□□□□ -1.46
ABCD3P28288 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
ABCD3P28288 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ABCD3P28288 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.9□□□□□ -1.46
ABCD3P28288 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.9□□□□□ -1.46
ABCD3P28288 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
ABCD3P28288 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.9□□□□□ -1.46
ABCD3P28288 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ABCD3P28288 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms