Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
BDNFP23560 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.34
BDNFP23560 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
BDNFP23560 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
BDNFP23560 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.7□□□□□ -1.34
BDNFP23560 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.7□□□□□ -1.34
BDNFP23560 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.7□□□□□ -1.34
BDNFP23560 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
BDNFP23560 UGT2B24P-201ENST00000514441 1597 ntBASIC6.7□□□□□ -1.34
BDNFP23560 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
BDNFP23560 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
BDNFP23560 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
BDNFP23560 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
BDNFP23560 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.7□□□□□ -1.34
BDNFP23560 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
BDNFP23560 AP002370.1-201ENST00000528055 1602 ntBASIC6.7□□□□□ -1.34
BDNFP23560 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
BDNFP23560 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.7□□□□□ -1.34
BDNFP23560 RNA5SP431-201ENST00000410312 120 ntBASIC6.7□□□□□ -1.34
BDNFP23560 AL691447.1-201ENST00000419456 387 ntBASIC6.7□□□□□ -1.34
BDNFP23560 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.7□□□□□ -1.34
BDNFP23560 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.7□□□□□ -1.34
BDNFP23560 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
BDNFP23560 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
BDNFP23560 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.7□□□□□ -1.34
BDNFP23560 ARL5AP3-201ENST00000439327 386 ntBASIC6.7□□□□□ -1.34
BDNFP23560 SOCS5P1-201ENST00000440415 949 ntBASIC6.7□□□□□ -1.34
BDNFP23560 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.7□□□□□ -1.34
BDNFP23560 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.7□□□□□ -1.34
BDNFP23560 AL133351.3-201ENST00000454998 193 ntBASIC6.7□□□□□ -1.34
BDNFP23560 RPL12P30-201ENST00000488389 499 ntBASIC6.7□□□□□ -1.34
BDNFP23560 SNX18P24-201ENST00000505249 671 ntBASIC6.7□□□□□ -1.34
BDNFP23560 OR4D12P-201ENST00000509361 911 ntBASIC6.7□□□□□ -1.34
BDNFP23560 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.7□□□□□ -1.34
BDNFP23560 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.7□□□□□ -1.34
BDNFP23560 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.7□□□□□ -1.34
BDNFP23560 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.7□□□□□ -1.34
BDNFP23560 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.7□□□□□ -1.34
BDNFP23560 AL845552.1-201ENST00000556820 323 ntBASIC6.7□□□□□ -1.34
BDNFP23560 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.7□□□□□ -1.34
BDNFP23560 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
BDNFP23560 FAM106CP-201ENST00000582212 507 ntBASIC6.7□□□□□ -1.34
BDNFP23560 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.7□□□□□ -1.34
BDNFP23560 AL133370.2-201ENST00000619934 439 ntBASIC6.7□□□□□ -1.34
BDNFP23560 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.7□□□□□ -1.34
BDNFP23560 AC073488.6-201ENST00000632293 754 ntBASIC6.7□□□□□ -1.34
BDNFP23560 AL357140.4-201ENST00000636827 412 ntBASIC6.7□□□□□ -1.34
BDNFP23560 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
BDNFP23560 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.7□□□□□ -1.34
BDNFP23560 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
BDNFP23560 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
BDNFP23560 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.7□□□□□ -1.34
BDNFP23560 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
BDNFP23560 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.7□□□□□ -1.34
BDNFP23560 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
BDNFP23560 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
BDNFP23560 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
BDNFP23560 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
BDNFP23560 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
BDNFP23560 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
BDNFP23560 MTCO1P8-201ENST00000416914 1523 ntBASIC6.7□□□□□ -1.34
BDNFP23560 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
BDNFP23560 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.7□□□□□ -1.34
BDNFP23560 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
BDNFP23560 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
BDNFP23560 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.69□□□□□ -1.34
BDNFP23560 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
BDNFP23560 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
BDNFP23560 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.69□□□□□ -1.34
BDNFP23560 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
BDNFP23560 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
BDNFP23560 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
BDNFP23560 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
BDNFP23560 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.69□□□□□ -1.34
BDNFP23560 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
BDNFP23560 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
BDNFP23560 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.69□□□□□ -1.34
BDNFP23560 RPL10P10-201ENST00000403509 664 ntBASIC6.69□□□□□ -1.34
BDNFP23560 U3.43-201ENST00000410734 213 ntBASIC6.69□□□□□ -1.34
BDNFP23560 RN7SKP108-201ENST00000411367 328 ntBASIC6.69□□□□□ -1.34
BDNFP23560 AC002524.1-201ENST00000411687 547 ntBASIC6.69□□□□□ -1.34
BDNFP23560 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
BDNFP23560 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.69□□□□□ -1.34
BDNFP23560 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.69□□□□□ -1.34
BDNFP23560 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.69□□□□□ -1.34
BDNFP23560 AL138899.2-201ENST00000439139 499 ntBASIC6.69□□□□□ -1.34
BDNFP23560 PCNPP2-201ENST00000441651 455 ntBASIC6.69□□□□□ -1.34
BDNFP23560 AC011742.2-201ENST00000443818 352 ntBASIC6.69□□□□□ -1.34
BDNFP23560 AC010240.2-201ENST00000445363 1205 ntBASIC6.69□□□□□ -1.34
BDNFP23560 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.69□□□□□ -1.34
BDNFP23560 HMGB1P7-201ENST00000450921 612 ntBASIC6.69□□□□□ -1.34
BDNFP23560 RN7SL254P-201ENST00000460609 284 ntBASIC6.69□□□□□ -1.34
BDNFP23560 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.69□□□□□ -1.34
BDNFP23560 AC093827.1-201ENST00000480094 861 ntBASIC6.69□□□□□ -1.34
BDNFP23560 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.69□□□□□ -1.34
BDNFP23560 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
BDNFP23560 AC095052.1-201ENST00000509955 863 ntBASIC6.69□□□□□ -1.34
BDNFP23560 KHDC1P1-201ENST00000511053 508 ntBASIC6.69□□□□□ -1.34
BDNFP23560 MAST4-IT1-201ENST00000514241 658 ntBASIC6.69□□□□□ -1.34
BDNFP23560 AC036111.2-201ENST00000533247 901 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms