Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LINC02035-201ENST00000610128 5476 ntBASIC8.16□□□□□ -1.1
RFX1P22670 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RFX1P22670 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RFX1P22670 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
RFX1P22670 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RFX1P22670 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
RFX1P22670 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
RFX1P22670 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RFX1P22670 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RFX1P22670 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RFX1P22670 MIR525-201ENST00000384978 85 ntBASIC8.16□□□□□ -1.1
RFX1P22670 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.16□□□□□ -1.1
RFX1P22670 RNA5SP498-201ENST00000411342 120 ntBASIC8.16□□□□□ -1.1
RFX1P22670 AC092745.2-202ENST00000411880 369 ntBASIC8.16□□□□□ -1.1
RFX1P22670 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RFX1P22670 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC8.16□□□□□ -1.1
RFX1P22670 AL049610.1-201ENST00000423374 372 ntBASIC8.16□□□□□ -1.1
RFX1P22670 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
RFX1P22670 RPL5P4-201ENST00000434805 886 ntBASIC8.16□□□□□ -1.1
RFX1P22670 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC8.16□□□□□ -1.1
RFX1P22670 USP9YP22-201ENST00000438971 294 ntBASIC8.16□□□□□ -1.1
RFX1P22670 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC8.16□□□□□ -1.1
RFX1P22670 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.16□□□□□ -1.1
RFX1P22670 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC8.16□□□□□ -1.1
RFX1P22670 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC8.16□□□□□ -1.1
RFX1P22670 AC079776.3-201ENST00000450665 370 ntBASIC8.16□□□□□ -1.1
RFX1P22670 PPIA-203ENST00000451562 544 ntTSL 2 BASIC8.16□□□□□ -1.1
RFX1P22670 RN7SL549P-201ENST00000478997 282 ntBASIC8.16□□□□□ -1.1
RFX1P22670 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC8.16□□□□□ -1.1
RFX1P22670 RPL7AP30-201ENST00000482859 796 ntBASIC8.16□□□□□ -1.1
RFX1P22670 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC8.16□□□□□ -1.1
RFX1P22670 RN7SL635P-201ENST00000492123 296 ntBASIC8.16□□□□□ -1.1
RFX1P22670 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC8.16□□□□□ -1.1
RFX1P22670 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC8.16□□□□□ -1.1
RFX1P22670 GCSHP1-201ENST00000512554 484 ntBASIC8.16□□□□□ -1.1
RFX1P22670 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
RFX1P22670 MRPS5P3-201ENST00000515577 166 ntBASIC8.16□□□□□ -1.1
RFX1P22670 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC8.16□□□□□ -1.1
RFX1P22670 AC100823.2-201ENST00000518337 699 ntBASIC8.16□□□□□ -1.1
RFX1P22670 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RFX1P22670 AP001317.1-201ENST00000531194 960 ntBASIC8.16□□□□□ -1.1
RFX1P22670 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC8.16□□□□□ -1.1
RFX1P22670 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RFX1P22670 AC092747.2-201ENST00000545069 983 ntBASIC8.16□□□□□ -1.1
RFX1P22670 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC8.16□□□□□ -1.1
RFX1P22670 RN7SL14P-201ENST00000579715 298 ntBASIC8.16□□□□□ -1.1
RFX1P22670 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC8.16□□□□□ -1.1
RFX1P22670 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC8.16□□□□□ -1.1
RFX1P22670 AC090220.1-201ENST00000593078 1699 ntBASIC8.16□□□□□ -1.1
RFX1P22670 AL021918.1-201ENST00000603933 236 ntBASIC8.16□□□□□ -1.1
RFX1P22670 FRG2MP-201ENST00000613317 856 ntBASIC8.16□□□□□ -1.1
RFX1P22670 AC023158.2-201ENST00000614876 543 ntBASIC8.16□□□□□ -1.1
RFX1P22670 AC073968.1-201ENST00000618594 637 ntBASIC8.16□□□□□ -1.1
RFX1P22670 AC009878.1-201ENST00000621819 340 ntBASIC8.16□□□□□ -1.1
RFX1P22670 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC8.16□□□□□ -1.1
RFX1P22670 MFSD8-218ENST00000641186 4448 ntBASIC8.16□□□□□ -1.1
RFX1P22670 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.16□□□□□ -1.1
RFX1P22670 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RFX1P22670 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
RFX1P22670 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
RFX1P22670 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.16□□□□□ -1.1
RFX1P22670 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
RFX1P22670 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
RFX1P22670 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RFX1P22670 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
RFX1P22670 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
RFX1P22670 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC8.16□□□□□ -1.1
RFX1P22670 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC8.16□□□□□ -1.1
RFX1P22670 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RFX1P22670 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.15□□□□□ -1.1
RFX1P22670 PARP4P1-201ENST00000435945 2337 ntBASIC8.15□□□□□ -1.1
RFX1P22670 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
RFX1P22670 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RFX1P22670 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
RFX1P22670 IFIT2-202ENST00000611722 3038 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
RFX1P22670 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.15□□□□□ -1.1
RFX1P22670 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
RFX1P22670 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
RFX1P22670 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RFX1P22670 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RFX1P22670 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
RFX1P22670 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RFX1P22670 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
RFX1P22670 AL139327.1-201ENST00000382988 348 ntBASIC8.15□□□□□ -1.1
RFX1P22670 RNU6-517P-201ENST00000384362 110 ntBASIC8.15□□□□□ -1.1
RFX1P22670 TAF9BP1-201ENST00000396646 746 ntBASIC8.15□□□□□ -1.1
RFX1P22670 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
RFX1P22670 OR6K4P-201ENST00000423179 955 ntBASIC8.15□□□□□ -1.1
RFX1P22670 MTCYBP5-201ENST00000423752 1135 ntBASIC8.15□□□□□ -1.1
RFX1P22670 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC8.15□□□□□ -1.1
RFX1P22670 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC8.15□□□□□ -1.1
RFX1P22670 FAM96AP1-201ENST00000430879 482 ntBASIC8.15□□□□□ -1.1
RFX1P22670 FTH1P10-202ENST00000430907 550 ntBASIC8.15□□□□□ -1.1
RFX1P22670 VDAC2P3-201ENST00000430995 828 ntBASIC8.15□□□□□ -1.1
RFX1P22670 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC8.15□□□□□ -1.1
RFX1P22670 PHB2P1-201ENST00000434943 890 ntBASIC8.15□□□□□ -1.1
RFX1P22670 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC8.15□□□□□ -1.1
RFX1P22670 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC8.15□□□□□ -1.1
RFX1P22670 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC8.15□□□□□ -1.1
RFX1P22670 AL591379.2-201ENST00000450223 397 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 1665.7 ms