Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 AC104997.1-201ENST00000519761 717 ntBASIC5.72□□□□□ -1.49
TNFRSF1BP20333 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 CHEK2P2-201ENST00000554701 672 ntBASIC5.72□□□□□ -1.49
TNFRSF1BP20333 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 AL512430.4-201ENST00000603085 613 ntBASIC5.72□□□□□ -1.49
TNFRSF1BP20333 AL591167.1-201ENST00000607321 456 ntBASIC5.72□□□□□ -1.49
TNFRSF1BP20333 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 TET1P1-201ENST00000426627 2301 ntBASIC5.72□□□□□ -1.49
TNFRSF1BP20333 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TNFRSF1BP20333 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.71□□□□□ -1.49
TNFRSF1BP20333 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TNFRSF1BP20333 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
TNFRSF1BP20333 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.49
TNFRSF1BP20333 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AC092070.2-203ENST00000598377 3644 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AL033519.1-201ENST00000407266 307 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 RN7SKP121-201ENST00000410842 305 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 DHFRP2-201ENST00000414224 547 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 VN1R37P-201ENST00000419096 748 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 GTF3AP6-201ENST00000432585 986 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 GAPDHP23-201ENST00000444823 993 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 RPL36AP55-201ENST00000454114 305 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 SEPT7P6-201ENST00000469999 1143 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AC034244.2-201ENST00000514668 858 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 RNU6-760P-201ENST00000516078 97 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 RNA5SP206-201ENST00000516703 121 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AC022826.1-201ENST00000519383 805 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 IGHV4-55-201ENST00000520889 368 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AC008429.4-201ENST00000521201 182 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 OR8X1P-201ENST00000534542 869 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AL121594.4-201ENST00000556211 1196 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 RPL7AP69-201ENST00000595306 806 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AC087468.1-201ENST00000604365 630 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AC013244.3-201ENST00000605614 388 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AC034236.3-201ENST00000605999 461 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AL589743.6-201ENST00000611025 117 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.71□□□□□ -1.5
TNFRSF1BP20333 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.71□□□□□ -1.5
TNFRSF1BP20333 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TNFRSF1BP20333 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms