Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC074198.1-201ENST00000506546 1397 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
PDGFAP04085 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 Z99496.1-201ENST00000469424 1477 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.28□□□□□ -1.24
PDGFAP04085 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.28□□□□□ -1.24
PDGFAP04085 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC7.28□□□□□ -1.24
PDGFAP04085 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
PDGFAP04085 AC008498.2-201ENST00000624033 2322 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
PDGFAP04085 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 Z99129.4-201ENST00000624649 2435 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
PDGFAP04085 EPS15P1-202ENST00000459691 2071 ntBASIC7.28□□□□□ -1.24
PDGFAP04085 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.27□□□□□ -1.24
PDGFAP04085 AC104162.1-201ENST00000430831 2382 ntBASIC7.27□□□□□ -1.24
PDGFAP04085 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.27□□□□□ -1.24
PDGFAP04085 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC7.27□□□□□ -1.24
PDGFAP04085 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
PDGFAP04085 AC106872.5-201ENST00000508856 1416 ntBASIC7.27□□□□□ -1.24
PDGFAP04085 AC092111.2-201ENST00000611627 1414 ntBASIC7.27□□□□□ -1.24
PDGFAP04085 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.27□□□□□ -1.24
PDGFAP04085 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC7.27□□□□□ -1.24
PDGFAP04085 AC008555.1-201ENST00000561778 2757 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.27□□□□□ -1.25
PDGFAP04085 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
PDGFAP04085 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC7.27□□□□□ -1.25
PDGFAP04085 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC7.27□□□□□ -1.25
PDGFAP04085 FGF7P2-201ENST00000332473 296 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC7.27□□□□□ -1.25
PDGFAP04085 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
PDGFAP04085 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.27□□□□□ -1.25
PDGFAP04085 SNORA10-201ENST00000384084 133 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 IL6-203ENST00000401651 539 ntTSL 2 BASIC7.27□□□□□ -1.25
PDGFAP04085 EEF1GP6-201ENST00000402309 905 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 PRELID1P2-201ENST00000407805 396 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 RBMY2GP-201ENST00000418671 1034 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
PDGFAP04085 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC7.27□□□□□ -1.25
PDGFAP04085 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.27□□□□□ -1.25
PDGFAP04085 ZNF863P-201ENST00000426746 417 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC7.27□□□□□ -1.25
PDGFAP04085 SEPT7P5-201ENST00000434048 306 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 RBMY2NP-201ENST00000434454 1028 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 UBE2V1P8-201ENST00000437166 265 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC231532.1-201ENST00000438584 312 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 CNOT7P2-201ENST00000441051 832 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 ARMC8P1-201ENST00000443069 1289 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC7.27□□□□□ -1.25
PDGFAP04085 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC7.27□□□□□ -1.25
PDGFAP04085 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC7.27□□□□□ -1.25
PDGFAP04085 RPL31P58-201ENST00000469001 379 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC073522.1-201ENST00000483312 377 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 ACTG1P13-201ENST00000486987 1043 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 OR4G11P-201ENST00000492842 939 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC7.27□□□□□ -1.25
PDGFAP04085 DYNLL1P6-201ENST00000503440 264 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC7.27□□□□□ -1.25
PDGFAP04085 AC091874.2-201ENST00000505889 720 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
PDGFAP04085 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.27□□□□□ -1.25
PDGFAP04085 IGBP1P5-201ENST00000507524 1000 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 RNU6-1225P-201ENST00000516336 65 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 RNU6-528P-201ENST00000516926 100 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC7.27□□□□□ -1.25
PDGFAP04085 AP003385.2-201ENST00000524910 973 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.27□□□□□ -1.25
PDGFAP04085 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.27□□□□□ -1.25
PDGFAP04085 MRPL40P1-201ENST00000542687 604 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC7.27□□□□□ -1.25
PDGFAP04085 AC074029.1-201ENST00000552531 1044 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC084757.1-201ENST00000559987 490 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 ANKRD36BP2-206ENST00000575193 1245 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC7.27□□□□□ -1.25
PDGFAP04085 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC7.27□□□□□ -1.25
PDGFAP04085 AL390838.2-201ENST00000602394 274 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC119501.1-201ENST00000603646 475 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC011453.2-201ENST00000603737 729 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 MARK3P1-201ENST00000604796 643 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 LSM1P2-201ENST00000604911 322 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 MIR7162-201ENST00000611134 69 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC135050.6-202ENST00000613584 392 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC138932.5-201ENST00000617759 563 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC048341.3-201ENST00000619323 491 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC103564.3-201ENST00000621194 220 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC7.27□□□□□ -1.25
PDGFAP04085 AL353898.2-201ENST00000623000 255 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC022140.2-201ENST00000623500 188 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC7.27□□□□□ -1.25
PDGFAP04085 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
PDGFAP04085 U6.107-201ENST00000637108 79 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC073869.7-201ENST00000640874 297 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC100871.1-201ENST00000507871 1456 ntBASIC7.27□□□□□ -1.25
PDGFAP04085 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 210.3 ms