Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 RN7SL426P-201ENST00000579106 295 ntBASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AC097641.3-201ENST00000613523 464 ntBASIC4.51□□□□□ -1.69
HLA-DQA1P01909 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AC117503.3-201ENST00000623811 601 ntBASIC4.51□□□□□ -1.69
HLA-DQA1P01909 SNX18P12-201ENST00000624821 759 ntBASIC4.51□□□□□ -1.69
HLA-DQA1P01909 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 AC083843.2-201ENST00000568248 6253 ntBASIC4.51□□□□□ -1.69
HLA-DQA1P01909 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HLA-DQA1P01909 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 Z95331.1-201ENST00000623075 23112 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 RN7SKP257-201ENST00000364525 309 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 MIR138-2-201ENST00000384916 84 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 RPLP1P10-201ENST00000413972 339 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 SMC4P1-201ENST00000414479 527 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC009303.1-201ENST00000426307 352 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 CRIP1P1-201ENST00000427567 185 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC108479.1-201ENST00000431142 427 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC242426.1-201ENST00000435270 960 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 CHCHD4P5-201ENST00000436684 427 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 MORF4-201ENST00000447135 971 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 EIF3LP2-201ENST00000457262 807 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC069304.1-201ENST00000491593 704 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 PFN2-213ENST00000494827 793 ntTSL 4 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC093325.1-201ENST00000508378 326 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC021733.2-201ENST00000518830 497 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC078899.1-201ENST00000521432 1185 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 MIR4433B-201ENST00000581329 102 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AL513327.3-201ENST00000602618 469 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AL512430.4-201ENST00000603085 613 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 AL162574.1-201ENST00000615702 950 ntBASIC4.5□□□□□ -1.69
HLA-DQA1P01909 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 ABCC13-202ENST00000463099 3842 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms