Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC5.06□□□□□ -1.6
UPK1BO75841 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.06□□□□□ -1.6
UPK1BO75841 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC5.06□□□□□ -1.6
UPK1BO75841 AC092718.4-201ENST00000566639 716 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.06□□□□□ -1.6
UPK1BO75841 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.06□□□□□ -1.6
UPK1BO75841 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 AL445670.1-201ENST00000618889 801 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.06□□□□□ -1.6
UPK1BO75841 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.06□□□□□ -1.6
UPK1BO75841 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1BO75841 AC092701.1-201ENST00000623627 1551 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1BO75841 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1BO75841 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.06□□□□□ -1.6
UPK1BO75841 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1BO75841 AC120036.2-201ENST00000509729 1474 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 AC005702.3-201ENST00000585345 1447 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.06□□□□□ -1.6
UPK1BO75841 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
UPK1BO75841 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1BO75841 AL731566.1-201ENST00000620490 1937 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 LINC01808-203ENST00000641932 1643 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1BO75841 ZNF652P1-201ENST00000442420 1309 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1BO75841 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1BO75841 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
UPK1BO75841 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
UPK1BO75841 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
UPK1BO75841 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1BO75841 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.05□□□□□ -1.6
UPK1BO75841 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
UPK1BO75841 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1BO75841 SETP15-201ENST00000412724 337 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.05□□□□□ -1.6
UPK1BO75841 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.05□□□□□ -1.6
UPK1BO75841 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 CICP10-201ENST00000439497 198 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.05□□□□□ -1.6
UPK1BO75841 AL157385.1-201ENST00000446973 268 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 RN7SL508P-201ENST00000464472 303 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 RN7SL308P-201ENST00000464971 297 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC5.05□□□□□ -1.6
UPK1BO75841 ANK3-213ENST00000486349 493 ntTSL 2 BASIC5.05□□□□□ -1.6
UPK1BO75841 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1BO75841 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.05□□□□□ -1.6
UPK1BO75841 AC016559.2-201ENST00000510759 359 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 MAST4-IT1-201ENST00000514241 658 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 AP005902.2-201ENST00000518393 307 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 AP006245.2-201ENST00000522004 300 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 AL133399.1-201ENST00000527476 298 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC5.05□□□□□ -1.6
UPK1BO75841 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.05□□□□□ -1.6
UPK1BO75841 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.05□□□□□ -1.6
UPK1BO75841 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.05□□□□□ -1.6
UPK1BO75841 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.05□□□□□ -1.6
UPK1BO75841 AL589765.5-201ENST00000596133 515 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.05□□□□□ -1.6
UPK1BO75841 MIR6751-201ENST00000610479 63 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 AP001962.1-201ENST00000624114 559 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 AC005858.3-201ENST00000624756 589 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 CR589904.1-203ENST00000636515 318 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1BO75841 AC079248.1-201ENST00000427568 1546 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1BO75841 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1BO75841 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.05□□□□□ -1.6
UPK1BO75841 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1BO75841 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1BO75841 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.05□□□□□ -1.6
UPK1BO75841 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
UPK1BO75841 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
UPK1BO75841 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1BO75841 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.05□□□□□ -1.6
UPK1BO75841 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
UPK1BO75841 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
UPK1BO75841 AC114947.2-201ENST00000565748 2125 ntBASIC5.05□□□□□ -1.6
UPK1BO75841 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
UPK1BO75841 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1BO75841 AC079097.1-201ENST00000512187 1399 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 TRIM51GP-201ENST00000534741 1350 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.04□□□□□ -1.6
UPK1BO75841 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1BO75841 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
UPK1BO75841 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1BO75841 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1BO75841 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1BO75841 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UPK1BO75841 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
UPK1BO75841 AC007618.1-201ENST00000366455 732 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.04□□□□□ -1.6
UPK1BO75841 OOSP1-201ENST00000398992 1270 ntBASIC5.04□□□□□ -1.6
UPK1BO75841 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK1BO75841 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.04□□□□□ -1.6
UPK1BO75841 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.04□□□□□ -1.6
UPK1BO75841 AL353611.1-201ENST00000417054 462 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK1BO75841 DHRS9-203ENST00000421653 1044 ntTSL 5 BASIC5.04□□□□□ -1.6
UPK1BO75841 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms