Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZIC3O60481 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.61□□□□□ -1.51
ZIC3O60481 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.61□□□□□ -1.51
ZIC3O60481 AL022237.1-201ENST00000446663 358 ntBASIC5.61□□□□□ -1.51
ZIC3O60481 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ZIC3O60481 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.61□□□□□ -1.51
ZIC3O60481 OR9N1P-201ENST00000491296 333 ntBASIC5.61□□□□□ -1.51
ZIC3O60481 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.61□□□□□ -1.51
ZIC3O60481 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ZIC3O60481 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.61□□□□□ -1.51
ZIC3O60481 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.61□□□□□ -1.51
ZIC3O60481 AC011416.1-201ENST00000514947 1732 ntBASIC5.61□□□□□ -1.51
ZIC3O60481 RN7SKP35-201ENST00000517210 151 ntBASIC5.61□□□□□ -1.51
ZIC3O60481 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.61□□□□□ -1.51
ZIC3O60481 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.61□□□□□ -1.51
ZIC3O60481 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.61□□□□□ -1.51
ZIC3O60481 OR7E10P-201ENST00000526420 991 ntBASIC5.61□□□□□ -1.51
ZIC3O60481 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
ZIC3O60481 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.61□□□□□ -1.51
ZIC3O60481 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.61□□□□□ -1.51
ZIC3O60481 AC022507.1-201ENST00000548349 1505 ntBASIC5.61□□□□□ -1.51
ZIC3O60481 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.61□□□□□ -1.51
ZIC3O60481 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.61□□□□□ -1.51
ZIC3O60481 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.61□□□□□ -1.51
ZIC3O60481 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.61□□□□□ -1.51
ZIC3O60481 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.61□□□□□ -1.51
ZIC3O60481 AC008957.3-201ENST00000624112 2242 ntBASIC5.61□□□□□ -1.51
ZIC3O60481 AC106858.1-201ENST00000637497 429 ntBASIC5.61□□□□□ -1.51
ZIC3O60481 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZIC3O60481 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.61□□□□□ -1.51
ZIC3O60481 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZIC3O60481 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
ZIC3O60481 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.61□□□□□ -1.51
ZIC3O60481 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZIC3O60481 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ZIC3O60481 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ZIC3O60481 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.6□□□□□ -1.51
ZIC3O60481 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ZIC3O60481 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
ZIC3O60481 CUL4AP1-201ENST00000514750 1863 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 AL669831.5-218ENST00000591702 1873 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.6□□□□□ -1.51
ZIC3O60481 HSPD1P9-201ENST00000420325 1636 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.6□□□□□ -1.51
ZIC3O60481 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
ZIC3O60481 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.6□□□□□ -1.51
ZIC3O60481 SNORA21-201ENST00000362423 132 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.6□□□□□ -1.51
ZIC3O60481 RN7SKP161-201ENST00000411110 305 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.6□□□□□ -1.51
ZIC3O60481 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.6□□□□□ -1.51
ZIC3O60481 SCAND3P1-201ENST00000439854 1060 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 RPS27AP3-201ENST00000453803 454 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 PPIAP7-201ENST00000454070 489 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 AP000547.1-201ENST00000454360 617 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 RN7SL221P-201ENST00000466190 281 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 RN7SKP70-201ENST00000516655 271 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 AP000620.1-201ENST00000527147 504 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 AC134349.2-201ENST00000535136 910 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.6□□□□□ -1.51
ZIC3O60481 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.6□□□□□ -1.51
ZIC3O60481 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.6□□□□□ -1.51
ZIC3O60481 AC092865.1-201ENST00000544395 1023 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.6□□□□□ -1.51
ZIC3O60481 AC134669.1-201ENST00000581275 672 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.6□□□□□ -1.51
ZIC3O60481 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.6□□□□□ -1.51
ZIC3O60481 AC011497.2-201ENST00000600255 639 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 AC084036.1-201ENST00000609190 508 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.6□□□□□ -1.51
ZIC3O60481 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.6□□□□□ -1.51
ZIC3O60481 AC024651.2-201ENST00000562480 2098 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.6□□□□□ -1.51
ZIC3O60481 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.6□□□□□ -1.51
ZIC3O60481 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
ZIC3O60481 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ZIC3O60481 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZIC3O60481 AC092692.1-201ENST00000623625 2595 ntBASIC5.6□□□□□ -1.51
ZIC3O60481 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
ZIC3O60481 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.59□□□□□ -1.51
ZIC3O60481 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.59□□□□□ -1.51
ZIC3O60481 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
ZIC3O60481 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms