Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.47□□□□□ -1.37
TRIM38O00635 GTF3AP6-201ENST00000432585 986 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 AC007679.3-201ENST00000434035 414 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM38O00635 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM38O00635 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM38O00635 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM38O00635 AC105420.1-201ENST00000504389 582 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM38O00635 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM38O00635 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM38O00635 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM38O00635 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM38O00635 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.47□□□□□ -1.37
TRIM38O00635 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM38O00635 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM38O00635 AC090115.2-201ENST00000548060 883 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.47□□□□□ -1.37
TRIM38O00635 AL136520.1-202ENST00000555494 763 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 AL121839.1-201ENST00000556233 1185 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.47□□□□□ -1.37
TRIM38O00635 AC005726.4-201ENST00000582858 458 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM38O00635 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM38O00635 AC093635.1-201ENST00000609028 555 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 AC005393.1-201ENST00000617916 584 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TRIM38O00635 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.47□□□□□ -1.37
TRIM38O00635 AC006453.5-201ENST00000636451 619 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM38O00635 AC010401.2-201ENST00000575137 4934 ntBASIC6.47□□□□□ -1.37
TRIM38O00635 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM38O00635 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM38O00635 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
TRIM38O00635 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
TRIM38O00635 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM38O00635 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM38O00635 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM38O00635 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM38O00635 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM38O00635 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM38O00635 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
TRIM38O00635 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.46□□□□□ -1.37
TRIM38O00635 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
TRIM38O00635 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM38O00635 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM38O00635 MTHFD2P5-201ENST00000320415 844 ntBASIC6.46□□□□□ -1.38
TRIM38O00635 RPL11P4-201ENST00000332269 436 ntBASIC6.46□□□□□ -1.38
TRIM38O00635 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM38O00635 MIR188-201ENST00000385034 86 ntBASIC6.46□□□□□ -1.38
TRIM38O00635 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM38O00635 MTND2P15-201ENST00000418575 892 ntBASIC6.46□□□□□ -1.38
TRIM38O00635 RPS7P12-201ENST00000422385 582 ntBASIC6.46□□□□□ -1.38
TRIM38O00635 AL139415.1-201ENST00000424862 352 ntBASIC6.46□□□□□ -1.38
TRIM38O00635 RPL17P35-201ENST00000432217 549 ntBASIC6.46□□□□□ -1.38
TRIM38O00635 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM38O00635 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.46□□□□□ -1.38
TRIM38O00635 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM38O00635 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM38O00635 AL138787.1-202ENST00000437804 898 ntBASIC6.46□□□□□ -1.38
TRIM38O00635 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM38O00635 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM38O00635 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM38O00635 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.46□□□□□ -1.38
TRIM38O00635 AC018645.1-201ENST00000505003 109 ntBASIC6.46□□□□□ -1.38
TRIM38O00635 MTND3P24-201ENST00000506306 329 ntBASIC6.46□□□□□ -1.38
TRIM38O00635 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM38O00635 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.46□□□□□ -1.38
TRIM38O00635 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM38O00635 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM38O00635 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
TRIM38O00635 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM38O00635 AC005702.3-201ENST00000585345 1447 ntBASIC6.46□□□□□ -1.38
TRIM38O00635 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM38O00635 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.46□□□□□ -1.38
TRIM38O00635 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM38O00635 CLIC4P2-201ENST00000601934 717 ntBASIC6.46□□□□□ -1.38
TRIM38O00635 OR4H6P-202ENST00000603819 340 ntBASIC6.46□□□□□ -1.38
TRIM38O00635 AC015982.1-201ENST00000608113 465 ntBASIC6.46□□□□□ -1.38
TRIM38O00635 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM38O00635 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM38O00635 AP000547.3-204ENST00000588548 2523 ntBASIC6.46□□□□□ -1.38
TRIM38O00635 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM38O00635 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.46□□□□□ -1.38
TRIM38O00635 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
TRIM38O00635 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
TRIM38O00635 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM38O00635 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM38O00635 DDX18P6-201ENST00000450119 1997 ntBASIC6.46□□□□□ -1.38
TRIM38O00635 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM38O00635 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM38O00635 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.45□□□□□ -1.38
TRIM38O00635 SAMM50P1-201ENST00000455403 1399 ntBASIC6.45□□□□□ -1.38
TRIM38O00635 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM38O00635 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM38O00635 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM38O00635 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM38O00635 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM38O00635 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
TRIM38O00635 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms