Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.48□□□□□ -1.37
O00370 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
O00370 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
O00370 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
O00370 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
O00370 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
O00370 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.48□□□□□ -1.37
O00370 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
O00370 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.48□□□□□ -1.37
O00370 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
O00370 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
O00370 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
O00370 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
O00370 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
O00370 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.47□□□□□ -1.37
O00370 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
O00370 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.47□□□□□ -1.37
O00370 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
O00370 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
O00370 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.47□□□□□ -1.37
O00370 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
O00370 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.47□□□□□ -1.37
O00370 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.47□□□□□ -1.37
O00370 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
O00370 AL132875.1-201ENST00000403623 949 ntBASIC6.47□□□□□ -1.37
O00370 RNA5SP431-201ENST00000410312 120 ntBASIC6.47□□□□□ -1.37
O00370 AL096829.1-201ENST00000413677 457 ntBASIC6.47□□□□□ -1.37
O00370 PTCD2P2-201ENST00000415579 1095 ntBASIC6.47□□□□□ -1.37
O00370 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.47□□□□□ -1.37
O00370 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.47□□□□□ -1.37
O00370 PNKDP1-201ENST00000435914 430 ntBASIC6.47□□□□□ -1.37
O00370 AC097463.1-201ENST00000447288 481 ntBASIC6.47□□□□□ -1.37
O00370 AC090589.1-201ENST00000473109 362 ntBASIC6.47□□□□□ -1.37
O00370 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.47□□□□□ -1.37
O00370 CYP4F27P-201ENST00000514557 494 ntBASIC6.47□□□□□ -1.37
O00370 RN7SKP35-201ENST00000517210 151 ntBASIC6.47□□□□□ -1.37
O00370 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.47□□□□□ -1.37
O00370 IGKV3D-25-201ENST00000519599 235 ntBASIC6.47□□□□□ -1.37
O00370 AC009879.1-201ENST00000520029 839 ntBASIC6.47□□□□□ -1.37
O00370 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
O00370 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.47□□□□□ -1.37
O00370 AC024405.1-201ENST00000532521 1042 ntBASIC6.47□□□□□ -1.37
O00370 AC084121.1-201ENST00000533882 835 ntBASIC6.47□□□□□ -1.37
O00370 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.47□□□□□ -1.37
O00370 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.47□□□□□ -1.37
O00370 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.47□□□□□ -1.37
O00370 AC068768.2-201ENST00000602352 343 ntBASIC6.47□□□□□ -1.37
O00370 FAM27E2-201ENST00000619668 403 ntBASIC6.47□□□□□ -1.37
O00370 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.47□□□□□ -1.37
O00370 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.47□□□□□ -1.37
O00370 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
O00370 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.47□□□□□ -1.37
O00370 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
O00370 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
O00370 AC022164.1-201ENST00000568767 2673 ntBASIC6.46□□□□□ -1.37
O00370 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
O00370 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
O00370 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
O00370 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
O00370 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
O00370 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
O00370 RNU1-134P-201ENST00000362935 165 ntBASIC6.46□□□□□ -1.38
O00370 RNU105B-201ENST00000364478 208 ntBASIC6.46□□□□□ -1.38
O00370 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.46□□□□□ -1.38
O00370 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
O00370 SNORA51.9-201ENST00000384295 124 ntBASIC6.46□□□□□ -1.38
O00370 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.46□□□□□ -1.38
O00370 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.46□□□□□ -1.38
O00370 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
O00370 RPS7P8-201ENST00000418311 581 ntBASIC6.46□□□□□ -1.38
O00370 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.46□□□□□ -1.38
O00370 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.46□□□□□ -1.38
O00370 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.46□□□□□ -1.38
O00370 AL353662.1-201ENST00000439099 327 ntBASIC6.46□□□□□ -1.38
O00370 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.46□□□□□ -1.38
O00370 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.46□□□□□ -1.38
O00370 ZNF619P1-201ENST00000446539 752 ntBASIC6.46□□□□□ -1.38
O00370 RPL23AP60-201ENST00000450011 454 ntBASIC6.46□□□□□ -1.38
O00370 CTSLP6-201ENST00000458273 1002 ntBASIC6.46□□□□□ -1.38
O00370 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.46□□□□□ -1.38
O00370 RN7SL741P-201ENST00000482473 289 ntBASIC6.46□□□□□ -1.38
O00370 AL035690.1-201ENST00000490892 383 ntBASIC6.46□□□□□ -1.38
O00370 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.46□□□□□ -1.38
O00370 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.46□□□□□ -1.38
O00370 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.46□□□□□ -1.38
O00370 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
O00370 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.46□□□□□ -1.38
O00370 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.46□□□□□ -1.38
O00370 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.46□□□□□ -1.38
O00370 AL845552.1-201ENST00000556820 323 ntBASIC6.46□□□□□ -1.38
O00370 AC026826.3-201ENST00000561747 158 ntBASIC6.46□□□□□ -1.38
O00370 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
O00370 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.46□□□□□ -1.38
O00370 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.46□□□□□ -1.38
O00370 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.46□□□□□ -1.38
O00370 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.46□□□□□ -1.38
O00370 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.46□□□□□ -1.38
O00370 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.46□□□□□ -1.38
O00370 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
O00370 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms