Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC108724.2-201ENST00000634593 290 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC104083.1-201ENST00000569449 2615 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 DDX11L16-201ENST00000507418 1306 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 MAPK10-296ENST00000641283 2826 ntAPPRIS P2 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AL022334.1-201ENST00000417397 1726 ntBASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 CWC27-204ENST00000508024 2103 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC008033.1-201ENST00000216407 1162 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 Y_RNA.450-201ENST00000384198 113 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 SNORA7B-201ENST00000384360 139 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC009237.2-201ENST00000421358 284 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC104843.2-201ENST00000427666 297 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC00853-201ENST00000429328 661 ntTSL 2 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 FTH1P16-201ENST00000435241 552 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AL022721.1-201ENST00000436521 505 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 OR13K1P-201ENST00000444577 975 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AL512593.1-201ENST00000444758 779 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AL034418.1-201ENST00000448675 860 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 PDSS1P2-201ENST00000449397 678 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 RPL7P31-201ENST00000450192 724 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC092569.1-201ENST00000455192 258 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 SNRPFP4-201ENST00000456366 242 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC146507.1-201ENST00000468335 354 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC079080.1-201ENST00000479841 822 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC008628.2-201ENST00000502605 298 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC098583.2-201ENST00000504151 372 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC100871.1-201ENST00000507871 1456 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC114786.2-201ENST00000510090 1426 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AP000445.1-201ENST00000526692 741 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 SSR2-215ENST00000529008 849 ntTSL 5 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC055716.1-201ENST00000550077 495 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 ANP32BP3-201ENST00000559213 706 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 KYNUP2-201ENST00000582280 1329 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC010761.2-202ENST00000582536 391 ntTSL 5 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 MIR548AB-201ENST00000584917 84 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AL669831.5-218ENST00000591702 1873 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 VN1R79P-201ENST00000593540 513 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AL365503.1-201ENST00000605247 905 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC009994.1-201ENST00000606889 253 ntBASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 SMG7-216ENST00000638826 219 ntTSL 2 BASIC7.65□□□□□ -1.18
PCDHGA11Q9Y5H2 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
PCDHGA11Q9Y5H2 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
PCDHGA11Q9Y5H2 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms