Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 ATP5F1P6-201ENST00000402768 767 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 RPL36P18-201ENST00000419316 318 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AL139415.1-201ENST00000424862 352 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 RN7SL714P-201ENST00000487050 298 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 RPL12P30-201ENST00000488389 499 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AC016550.1-201ENST00000505348 785 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 HMGN1P15-201ENST00000513870 295 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AL049874.4-201ENST00000557593 255 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AC018558.5-201ENST00000565840 952 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 OR1AB1P-201ENST00000585564 761 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AL136097.3-201ENST00000611097 505 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AL049777.1-201ENST00000622740 518 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AC020763.5-201ENST00000623298 430 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AP001962.1-201ENST00000624114 559 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AL132640.3-201ENST00000630473 177 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 METTL15-211ENST00000634762 718 ntTSL 5 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 OR7E91P-202ENST00000642062 1198 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 MAPK10-323ENST00000641493 3207 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 AL353743.3-201ENST00000442109 1468 ntBASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.41□□□□□ -1.22
CTDP1Q9Y5B0 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 AL591848.4-201ENST00000567832 3472 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 RN7SKP144-201ENST00000411108 279 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 AL035422.1-201ENST00000414193 397 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 OR51A6P-201ENST00000418680 1004 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 AC091390.2-201ENST00000432573 374 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 LDHAP2-201ENST00000437325 985 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 EIF5AP4-201ENST00000441206 465 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 NPM1P21-201ENST00000513394 762 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 RNA5SP206-201ENST00000516703 121 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 HMGN2P47-201ENST00000559378 272 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 AL953862.2-201ENST00000603089 820 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 AC090912.3-201ENST00000609775 533 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 AL050303.3-201ENST00000613704 284 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 AC241377.1-201ENST00000619797 406 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 AL162233.1-201ENST00000620014 944 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 AC022400.9-201ENST00000623633 273 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 AC010872.1-201ENST00000624225 675 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 MIR1910-201ENST00000636955 80 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 OR51C1P-202ENST00000641159 1444 ntBASIC7.4□□□□□ -1.22
CTDP1Q9Y5B0 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CTDP1Q9Y5B0 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CTDP1Q9Y5B0 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CTDP1Q9Y5B0 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.4□□□□□ -1.23
CTDP1Q9Y5B0 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CTDP1Q9Y5B0 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CTDP1Q9Y5B0 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
CTDP1Q9Y5B0 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
CTDP1Q9Y5B0 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CTDP1Q9Y5B0 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
CTDP1Q9Y5B0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CTDP1Q9Y5B0 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.39□□□□□ -1.23
CTDP1Q9Y5B0 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CTDP1Q9Y5B0 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CTDP1Q9Y5B0 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CTDP1Q9Y5B0 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.39□□□□□ -1.23
CTDP1Q9Y5B0 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CTDP1Q9Y5B0 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CTDP1Q9Y5B0 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CTDP1Q9Y5B0 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.39□□□□□ -1.23
CTDP1Q9Y5B0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CTDP1Q9Y5B0 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms