Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC025262.3-201ENST00000623666 360 ntBASIC6.35□□□□□ -1.39
CISHQ9NSE2 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.35□□□□□ -1.39
CISHQ9NSE2 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CISHQ9NSE2 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CISHQ9NSE2 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CISHQ9NSE2 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.35□□□□□ -1.39
CISHQ9NSE2 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC6.35□□□□□ -1.39
CISHQ9NSE2 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CISHQ9NSE2 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CISHQ9NSE2 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CISHQ9NSE2 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CISHQ9NSE2 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.34□□□□□ -1.39
CISHQ9NSE2 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CISHQ9NSE2 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.34□□□□□ -1.39
CISHQ9NSE2 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CISHQ9NSE2 SNORD1C-201ENST00000363315 78 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.34□□□□□ -1.39
CISHQ9NSE2 RPS4XP5-201ENST00000419038 768 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.34□□□□□ -1.39
CISHQ9NSE2 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.34□□□□□ -1.39
CISHQ9NSE2 RPS12P17-201ENST00000438591 377 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 AL390879.1-201ENST00000439143 386 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 AL663074.2-201ENST00000440621 479 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.34□□□□□ -1.39
CISHQ9NSE2 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.34□□□□□ -1.39
CISHQ9NSE2 AL603882.1-201ENST00000463059 681 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 PFN1P6-201ENST00000476786 399 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 RN7SL193P-201ENST00000491708 276 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 AC025458.1-201ENST00000506046 166 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 SCARNA18.1-201ENST00000516330 83 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 AC005363.1-201ENST00000530779 351 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CISHQ9NSE2 OR4A42P-201ENST00000531397 938 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 TOMM20P1-201ENST00000534518 427 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.34□□□□□ -1.39
CISHQ9NSE2 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.34□□□□□ -1.39
CISHQ9NSE2 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.34□□□□□ -1.39
CISHQ9NSE2 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.34□□□□□ -1.39
CISHQ9NSE2 MIR6793-201ENST00000612376 63 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.34□□□□□ -1.39
CISHQ9NSE2 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.34□□□□□ -1.39
CISHQ9NSE2 OR2AH1P-202ENST00000641232 2744 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 ZNF840P-201ENST00000504759 1996 ntBASIC6.34□□□□□ -1.39
CISHQ9NSE2 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CISHQ9NSE2 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CISHQ9NSE2 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CISHQ9NSE2 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CISHQ9NSE2 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CISHQ9NSE2 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CISHQ9NSE2 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CISHQ9NSE2 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.33□□□□□ -1.4
CISHQ9NSE2 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CISHQ9NSE2 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 RNA5SP273-201ENST00000362484 113 ntBASIC6.33□□□□□ -1.4
CISHQ9NSE2 RN7SKP275-201ENST00000364626 301 ntBASIC6.33□□□□□ -1.4
CISHQ9NSE2 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 VN1R110P-201ENST00000438988 971 ntBASIC6.33□□□□□ -1.4
CISHQ9NSE2 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 RPL38P3-201ENST00000484463 213 ntBASIC6.33□□□□□ -1.4
CISHQ9NSE2 TOMM22P4-201ENST00000511318 336 ntBASIC6.33□□□□□ -1.4
CISHQ9NSE2 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 OR5H7P-201ENST00000514084 930 ntBASIC6.33□□□□□ -1.4
CISHQ9NSE2 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 TXNP4-201ENST00000575018 310 ntBASIC6.33□□□□□ -1.4
CISHQ9NSE2 MIR4776-2-201ENST00000580204 80 ntBASIC6.33□□□□□ -1.4
CISHQ9NSE2 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CISHQ9NSE2 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 SNX18P12-201ENST00000624821 759 ntBASIC6.33□□□□□ -1.4
CISHQ9NSE2 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CISHQ9NSE2 AL161756.3-201ENST00000641216 2071 ntBASIC6.33□□□□□ -1.4
CISHQ9NSE2 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CISHQ9NSE2 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CISHQ9NSE2 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CISHQ9NSE2 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CISHQ9NSE2 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CISHQ9NSE2 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.32□□□□□ -1.4
CISHQ9NSE2 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms