Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ASB8-203ENST00000535988 679 ntTSL 2 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
VTA1Q9NP79 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
VTA1Q9NP79 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
VTA1Q9NP79 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
VTA1Q9NP79 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
VTA1Q9NP79 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
VTA1Q9NP79 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 SPATA31C1-201ENST00000420021 3895 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC007406.5-201ENST00000570140 3170 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 SEPT7P8-201ENST00000413308 775 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 VN1R31P-201ENST00000417498 730 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 MARK2P12-201ENST00000420129 585 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC008753.1-201ENST00000423096 284 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 UBE2D3P3-201ENST00000426992 425 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 RPS29P14-201ENST00000431518 171 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 RAB9AP5-201ENST00000437794 597 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 AL645638.1-201ENST00000440519 361 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 RAB9AP2-201ENST00000443911 597 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 RAB28P3-201ENST00000448325 597 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 PPIAP27-201ENST00000453800 265 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 AL139156.3-201ENST00000454802 394 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 AL133351.3-201ENST00000454998 193 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 TVP23BP2-201ENST00000455082 615 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 AP002345.1-201ENST00000456493 928 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC022336.1-201ENST00000475510 337 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 RN7SL326P-201ENST00000477493 296 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 OR9N1P-202ENST00000494289 481 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 RPEP1-201ENST00000504507 658 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 PRMT5P1-201ENST00000514351 598 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 TRIM77BP-201ENST00000524985 1119 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC092332.1-201ENST00000563684 829 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC005332.4-201ENST00000592752 579 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC245884.10-201ENST00000597355 337 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 AL096803.3-201ENST00000609032 532 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 AL096712.1-201ENST00000614561 159 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC024884.1-201ENST00000620583 399 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC009269.6-201ENST00000621778 588 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC007993.1-201ENST00000621298 2430 ntBASIC7.2□□□□□ -1.26
VTA1Q9NP79 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.2□□□□□ -1.26
VTA1Q9NP79 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
VTA1Q9NP79 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 AC119674.1-202ENST00000641333 1860 ntBASIC7.19□□□□□ -1.26
VTA1Q9NP79 AC011455.2-201ENST00000599320 3336 ntBASIC7.19□□□□□ -1.26
VTA1Q9NP79 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.19□□□□□ -1.26
VTA1Q9NP79 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 CR382285.2-201ENST00000624662 1495 ntBASIC7.19□□□□□ -1.26
VTA1Q9NP79 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
VTA1Q9NP79 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms