Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 LINC01725-205ENST00000457273 1991 ntTSL 2 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 RPAP1-202ENST00000561603 3906 ntTSL 5 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 CAST-244ENST00000515663 1473 ntTSL 2 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 PCDHB1-201ENST00000306549 8210 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 HRH2-204ENST00000636584 4067 ntTSL 3 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 OR1J2-201ENST00000335302 942 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 RN7SKP239-201ENST00000364814 295 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 RNU6-534P-201ENST00000364877 106 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 FANK1-201ENST00000368689 522 ntTSL 3 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 Y_RNA.402-201ENST00000383972 102 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC068533.2-201ENST00000411872 306 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 OFD1P2Y-201ENST00000421895 1149 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC018630.2-202ENST00000422992 927 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 DDX11L10-201ENST00000430178 571 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 RPS3AP49-201ENST00000472161 790 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC090589.1-201ENST00000473109 362 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 UBTFL6-201ENST00000477929 1024 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC008799.1-201ENST00000495909 457 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC006499.5-201ENST00000505037 514 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC016559.1-201ENST00000511420 199 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 MEPE-206ENST00000511670 550 ntTSL 4 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 SMARCE1P4-201ENST00000523647 241 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC093027.1-201ENST00000546698 429 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC106028.1-201ENST00000554322 526 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC098850.2-201ENST00000578710 686 ntTSL 5 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC090415.1-201ENST00000581877 847 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC019193.3-201ENST00000609144 554 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AL161931.1-201ENST00000612768 246 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 MIR7844-201ENST00000616161 122 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 LIMCH1-209ENST00000509277 3474 ntTSL 2 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 PRCP-202ENST00000393399 2120 ntTSL 2 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC093616.1-201ENST00000427434 2095 ntBASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 CCDC113-202ENST00000443128 5110 ntTSL 2 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 TBC1D8B-206ENST00000481617 4098 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 TCTN3-207ENST00000614499 2739 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
CNTNAP3Q9BZ76 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 NVL-202ENST00000340871 2431 ntTSL 2 BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 ZNF763-201ENST00000343949 2621 ntAPPRIS P2 TSL 2 BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 AL137784.1-201ENST00000407121 745 ntBASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 AL662791.3-201ENST00000413771 776 ntBASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 XKRYP4-201ENST00000414395 483 ntBASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 HCG21-204ENST00000419481 605 ntTSL 3 BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC7.63□□□□□ -1.19
CNTNAP3Q9BZ76 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms