Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 MIR8080-201ENST00000622224 89 ntBASIC8.99□□□□□ -0.97
SCAPERQ9BY12 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 AL359091.1-201ENST00000449048 1734 ntBASIC8.99□□□□□ -0.97
SCAPERQ9BY12 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
SCAPERQ9BY12 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 AL121835.1-201ENST00000404250 354 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 RPL12P3-201ENST00000440080 396 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 AC005297.1-201ENST00000444765 862 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 RPS27AP3-201ENST00000453803 454 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 FRG2FP-204ENST00000453982 852 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 AC091685.2-201ENST00000454924 864 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 AC100832.1-201ENST00000471945 383 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 AC253576.1-201ENST00000511645 1156 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 Mico1.1-201ENST00000611698 204 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 RPSAP73-201ENST00000614820 330 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 AC005840.5-201ENST00000619166 599 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 AC068870.2-201ENST00000620635 389 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 OR11H2-202ENST00000641517 1085 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 SRRM1P3-201ENST00000426911 2678 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 TEK-204ENST00000519097 3836 ntTSL 2 BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 FO082842.1-201ENST00000423552 1370 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 EEF1A1P24-201ENST00000451469 1378 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 CYP4Z2P-201ENST00000423332 1512 ntBASIC8.98□□□□□ -0.97
SCAPERQ9BY12 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SCAPERQ9BY12 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 RNA5SP507-201ENST00000363603 121 ntBASIC8.97□□□□□ -0.97
SCAPERQ9BY12 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 CBX1P5-201ENST00000475330 559 ntBASIC8.97□□□□□ -0.97
SCAPERQ9BY12 OR2AO1P-201ENST00000476497 403 ntBASIC8.97□□□□□ -0.97
SCAPERQ9BY12 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 MIR5095-201ENST00000578844 88 ntBASIC8.97□□□□□ -0.97
SCAPERQ9BY12 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 AC007842.1-201ENST00000597336 2039 ntBASIC8.97□□□□□ -0.97
SCAPERQ9BY12 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 AC012254.5-201ENST00000623573 478 ntBASIC8.97□□□□□ -0.97
SCAPERQ9BY12 AC104162.1-201ENST00000430831 2382 ntBASIC8.97□□□□□ -0.97
SCAPERQ9BY12 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 RPL23AP27-201ENST00000415161 451 ntBASIC8.97□□□□□ -0.97
SCAPERQ9BY12 RPS4XP5-201ENST00000419038 768 ntBASIC8.97□□□□□ -0.97
SCAPERQ9BY12 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 NRBF2P4-201ENST00000520874 850 ntBASIC8.97□□□□□ -0.97
SCAPERQ9BY12 ASB8-202ENST00000535055 657 ntTSL 2 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC8.97□□□□□ -0.97
SCAPERQ9BY12 SUGT1P3-202ENST00000604259 383 ntBASIC8.97□□□□□ -0.97
SCAPERQ9BY12 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms