Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC127024.6-201ENST00000621598 424 ntBASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 OR13C1P-202ENST00000641378 2919 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 RNFT1P3-201ENST00000340898 1052 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 AL132875.1-201ENST00000403623 949 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 RNA5SP156-201ENST00000410250 110 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 RNA5SP178-201ENST00000410380 128 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 RPL12P12-201ENST00000424633 501 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 LYPLA1P1-201ENST00000434514 622 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 TRIM60P16-201ENST00000444048 694 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 AL512593.1-201ENST00000444758 779 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 RN7SL193P-201ENST00000491708 276 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 AC008429.4-201ENST00000521201 182 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 AC021269.1-201ENST00000526860 705 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 MIR6809-201ENST00000612189 116 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 MIR6793-201ENST00000612376 63 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 CCNT2P1-201ENST00000423082 1315 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 CIR1P2-201ENST00000514821 1342 ntBASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RPAP1Q9BWH6 MTCO1P11-201ENST00000429111 1528 ntBASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 AC092070.2-203ENST00000598377 3644 ntBASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 BX284632.2-201ENST00000421091 399 ntBASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 GAPDHP75-201ENST00000433910 943 ntBASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 AL512605.1-202ENST00000441919 381 ntBASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 SEPT14P12-201ENST00000442280 560 ntBASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 AL359955.2-201ENST00000445380 353 ntBASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 AC073594.1-201ENST00000462065 364 ntBASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 AC092865.1-201ENST00000544395 1023 ntBASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 AP005119.1-201ENST00000580956 292 ntBASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 AL136228.1-201ENST00000622221 319 ntBASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.36□□□□□ -1.23
RPAP1Q9BWH6 LCOR-201ENST00000286067 4542 ntBASIC7.35□□□□□ -1.23
RPAP1Q9BWH6 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.35□□□□□ -1.23
RPAP1Q9BWH6 FUNDC2P3-201ENST00000334716 533 ntBASIC7.35□□□□□ -1.23
RPAP1Q9BWH6 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.35□□□□□ -1.23
RPAP1Q9BWH6 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.35□□□□□ -1.23
RPAP1Q9BWH6 AC079355.1-201ENST00000421770 223 ntBASIC7.35□□□□□ -1.23
RPAP1Q9BWH6 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.35□□□□□ -1.23
RPAP1Q9BWH6 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RPAP1Q9BWH6 AL161636.2-201ENST00000445179 927 ntBASIC7.35□□□□□ -1.23
RPAP1Q9BWH6 FTLP8-201ENST00000446770 267 ntBASIC7.35□□□□□ -1.23
RPAP1Q9BWH6 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.35□□□□□ -1.23
RPAP1Q9BWH6 ACA64.1-201ENST00000459171 127 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 238.9 ms