Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 FAM183DP-201ENST00000421987 399 ntBASIC6.13□□□□□ -1.43
VMP1Q96GC9 RCC2P2-201ENST00000422174 918 ntBASIC6.13□□□□□ -1.43
VMP1Q96GC9 GPN3P1-201ENST00000423883 535 ntBASIC6.13□□□□□ -1.43
VMP1Q96GC9 Z68868.1-201ENST00000429048 544 ntBASIC6.13□□□□□ -1.43
VMP1Q96GC9 OR6R1P-201ENST00000431838 940 ntBASIC6.13□□□□□ -1.43
VMP1Q96GC9 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 AC092601.1-201ENST00000444526 383 ntBASIC6.13□□□□□ -1.43
VMP1Q96GC9 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 AC107015.1-201ENST00000466902 747 ntBASIC6.13□□□□□ -1.43
VMP1Q96GC9 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VMP1Q96GC9 AC044810.1-201ENST00000480271 711 ntBASIC6.13□□□□□ -1.43
VMP1Q96GC9 OR11I1P-201ENST00000486033 954 ntBASIC6.13□□□□□ -1.43
VMP1Q96GC9 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 AC025283.1-201ENST00000572039 734 ntBASIC6.13□□□□□ -1.43
VMP1Q96GC9 RN7SL208P-201ENST00000577964 296 ntBASIC6.13□□□□□ -1.43
VMP1Q96GC9 SYPL1P2-201ENST00000582878 727 ntBASIC6.13□□□□□ -1.43
VMP1Q96GC9 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 AL356986.1-201ENST00000604085 341 ntBASIC6.13□□□□□ -1.43
VMP1Q96GC9 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 AC068726.1-201ENST00000610993 341 ntBASIC6.13□□□□□ -1.43
VMP1Q96GC9 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.13□□□□□ -1.43
VMP1Q96GC9 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VMP1Q96GC9 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
VMP1Q96GC9 NLRP3P1-201ENST00000622303 1785 ntBASIC6.13□□□□□ -1.43
VMP1Q96GC9 OR9K1P-202ENST00000641111 3217 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 AC092724.1-201ENST00000624623 3397 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
VMP1Q96GC9 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VMP1Q96GC9 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VMP1Q96GC9 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VMP1Q96GC9 SNORA64.3-201ENST00000365647 134 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VMP1Q96GC9 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 SEPT14P1-201ENST00000458703 648 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 RPS7P10-201ENST00000464254 603 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 RN7SL836P-201ENST00000476140 296 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 AC092824.1-201ENST00000483524 576 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 SCARNA5-201ENST00000516201 276 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 RPL3P13-201ENST00000550415 216 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 AC026956.1-201ENST00000558741 396 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 MTND2P13-201ENST00000577438 1039 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 AC012254.3-201ENST00000591183 2117 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 AL078623.1-201ENST00000602702 907 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 AC138473.1-201ENST00000605717 526 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 AC025171.4-201ENST00000607250 1047 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VMP1Q96GC9 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VMP1Q96GC9 AC023245.2-201ENST00000530760 2978 ntBASIC6.12□□□□□ -1.43
VMP1Q96GC9 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
VMP1Q96GC9 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VMP1Q96GC9 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VMP1Q96GC9 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VMP1Q96GC9 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VMP1Q96GC9 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VMP1Q96GC9 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 RNU1-146P-201ENST00000364015 165 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VMP1Q96GC9 RNU11-201ENST00000387069 134 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
VMP1Q96GC9 AC245036.1-201ENST00000391727 309 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VMP1Q96GC9 EI24P3-201ENST00000399046 1062 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 AL133260.1-201ENST00000405720 405 ntBASIC6.11□□□□□ -1.43
VMP1Q96GC9 RN7SKP221-201ENST00000410420 301 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms