Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC090568.1-201ENST00000509499 856 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 RNA5SP96-201ENST00000516041 107 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 SCARNA5-201ENST00000516201 276 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 AP005902.2-201ENST00000518393 307 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.25□□□□□ -1.25
ERCC4Q92889 IGHVIII-11-1-201ENST00000522733 267 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.25□□□□□ -1.25
ERCC4Q92889 CKS1BP1-201ENST00000555221 240 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.25□□□□□ -1.25
ERCC4Q92889 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC7.25□□□□□ -1.25
ERCC4Q92889 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC7.25□□□□□ -1.25
ERCC4Q92889 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC7.25□□□□□ -1.25
ERCC4Q92889 OR7E19P-202ENST00000589942 844 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.25□□□□□ -1.25
ERCC4Q92889 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.25□□□□□ -1.25
ERCC4Q92889 AC112220.2-201ENST00000605513 533 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 AL137000.1-201ENST00000610528 1244 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 LINC00216-201ENST00000623548 1126 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 AC004808.1-201ENST00000627671 721 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 AC099654.9-201ENST00000637055 678 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 AP000550.3-201ENST00000637734 379 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 TMEM30CP-203ENST00000637814 1035 ntBASIC7.25□□□□□ -1.25
ERCC4Q92889 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC7.25□□□□□ -1.25
ERCC4Q92889 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.25□□□□□ -1.25
ERCC4Q92889 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC4Q92889 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC4Q92889 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
ERCC4Q92889 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
ERCC4Q92889 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
ERCC4Q92889 AC105235.1-201ENST00000623208 1816 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
ERCC4Q92889 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC4Q92889 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC4Q92889 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
ERCC4Q92889 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC4Q92889 SNORD51.1-201ENST00000365405 77 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 AMZ2P2-201ENST00000406819 1057 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 AL136100.1-201ENST00000407696 330 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 AC116036.1-201ENST00000412199 367 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 AL359885.1-201ENST00000415786 903 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.24□□□□□ -1.25
ERCC4Q92889 AL121882.1-201ENST00000422893 417 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.24□□□□□ -1.25
ERCC4Q92889 SETP9-201ENST00000423837 832 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 MTCO2P1-201ENST00000424648 477 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC4Q92889 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC4Q92889 AC004854.1-201ENST00000440356 349 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC7.24□□□□□ -1.25
ERCC4Q92889 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC7.24□□□□□ -1.25
ERCC4Q92889 AL139824.2-201ENST00000458731 1095 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 AL079303.1-201ENST00000486611 463 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 RPL19P11-201ENST00000495944 589 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC7.24□□□□□ -1.25
ERCC4Q92889 AC091965.3-201ENST00000506236 208 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC4Q92889 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC7.24□□□□□ -1.25
ERCC4Q92889 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC4Q92889 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.24□□□□□ -1.25
ERCC4Q92889 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC4Q92889 RBMS2P1-201ENST00000525031 1226 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC7.24□□□□□ -1.25
ERCC4Q92889 AC090115.2-201ENST00000548060 883 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC7.24□□□□□ -1.25
ERCC4Q92889 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC4Q92889 AC026956.1-201ENST00000558741 396 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 MIR744-201ENST00000578242 98 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC7.24□□□□□ -1.25
ERCC4Q92889 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.24□□□□□ -1.25
ERCC4Q92889 OR7M1P-201ENST00000608946 533 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 AC096586.2-201ENST00000610260 441 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
ERCC4Q92889 AC074276.2-201ENST00000619891 348 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 AC005355.2-201ENST00000625064 484 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC7.24□□□□□ -1.25
ERCC4Q92889 AC013437.2-201ENST00000639587 677 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC4Q92889 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.24□□□□□ -1.25
ERCC4Q92889 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC4Q92889 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
ERCC4Q92889 AL645568.2-201ENST00000432815 1337 ntBASIC7.24□□□□□ -1.25
ERCC4Q92889 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC7.24□□□□□ -1.25
ERCC4Q92889 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC7.24□□□□□ -1.25
ERCC4Q92889 AC110792.3-201ENST00000595906 1614 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
ERCC4Q92889 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC4Q92889 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC4Q92889 AC139426.3-201ENST00000605648 2059 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
ERCC4Q92889 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.23□□□□□ -1.25
ERCC4Q92889 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC4Q92889 AP002512.4-202ENST00000641599 4530 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC4Q92889 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC4Q92889 AL356057.1-202ENST00000402263 756 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 AC069282.1-201ENST00000411911 526 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 AL359092.1-201ENST00000417156 265 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 AL929472.1-201ENST00000417484 429 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 AC106883.1-201ENST00000418805 562 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 RPL23AP85-201ENST00000421838 433 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms