Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 AC012254.3-201ENST00000591183 2117 ntBASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SHROOM3Q8TF72 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 RPL35AP3-201ENST00000414680 288 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 AC016027.5-201ENST00000427227 210 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 AL663074.2-201ENST00000440621 479 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 RBMY2AP-201ENST00000445405 1157 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 RBMY2CP-201ENST00000448575 1157 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 RBMY2DP-202ENST00000448881 1157 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 RBMY2BP-202ENST00000451071 1156 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 PFN1P6-201ENST00000476786 399 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 AC090958.1-201ENST00000511122 351 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 MIR132-201ENST00000591554 101 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 AL161756.3-201ENST00000641216 2071 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 NBPF8-201ENST00000583271 5330 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 AC136624.1-201ENST00000400791 413 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 AL354890.1-201ENST00000413730 346 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 EEF1B2P8-201ENST00000414101 671 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 ATP5LP2-201ENST00000440646 311 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 AC007225.2-201ENST00000562529 256 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 AC090651.1-201ENST00000567865 634 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 AC020978.7-201ENST00000575953 1187 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 AC024940.4-201ENST00000605507 246 ntBASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
SHROOM3Q8TF72 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 RNU1-134P-201ENST00000362935 165 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 SNORA70.9-201ENST00000384370 135 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AC116036.1-201ENST00000412199 367 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 PTCD2P2-201ENST00000415579 1095 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AC130360.1-201ENST00000425489 1117 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 NANOGP4-201ENST00000427230 913 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AC104164.1-201ENST00000460282 590 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AC023194.2-201ENST00000465398 406 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 RN7SL193P-201ENST00000491708 276 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AC130365.2-201ENST00000525882 1201 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AC002519.2-203ENST00000567043 837 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AP001437.1-201ENST00000608783 456 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AC073488.6-201ENST00000632293 754 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AC110716.2-201ENST00000563865 3945 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 COX6B1P3-201ENST00000312310 260 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 OR2W4P-201ENST00000406496 926 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 RNA5SP156-201ENST00000410250 110 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms