Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 CYCSP25-201ENST00000525280 316 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AL121579.2-201ENST00000555466 590 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC015802.2-201ENST00000589690 189 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AL021918.2-201ENST00000613415 194 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 MIR6811-201ENST00000620409 58 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 SMG1P5-202ENST00000529428 4219 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 SMG1P2-201ENST00000566127 4221 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 TEK-205ENST00000615002 4666 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 RN7SKP286-201ENST00000410894 299 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 RN7SL629P-201ENST00000489622 285 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC010998.3-201ENST00000613871 631 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 MIR6810-201ENST00000622701 70 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 CDY5P-201ENST00000411487 1580 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 CDY9P-201ENST00000451397 1580 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AL136038.1-201ENST00000497246 351 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AL136228.1-201ENST00000622221 319 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 ARHGAP42P4-201ENST00000549782 2934 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 GABARAPL3-201ENST00000412799 354 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AL355355.1-201ENST00000442900 793 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC126175.1-201ENST00000617041 758 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC245014.3-201ENST00000618589 347 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 KCNMB3P1-202ENST00000493696 3389 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 YES1-203ENST00000577961 4554 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AL034549.2-201ENST00000618285 3373 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC074050.1-201ENST00000563247 211 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 RN7SL787P-201ENST00000613000 284 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 AL031651.1-201ENST00000615357 1438 ntBASIC1.87□□□□□ -2.11
SYNE1Q8NF91 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SYNE1Q8NF91 OR52B3P-201ENST00000314715 928 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms