Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 AC005725.1-201ENST00000577346 2607 ntBASIC9.19□□□□□ -0.94
VPS8Q8N3P4 WDR95P-201ENST00000425638 1542 ntBASIC9.19□□□□□ -0.94
VPS8Q8N3P4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 MIR130A-201ENST00000385274 89 ntBASIC9.18□□□□□ -0.94
VPS8Q8N3P4 AL121977.1-201ENST00000401636 979 ntBASIC9.18□□□□□ -0.94
VPS8Q8N3P4 HMGB1P20-201ENST00000402555 677 ntBASIC9.18□□□□□ -0.94
VPS8Q8N3P4 RN7SKP286-201ENST00000410894 299 ntBASIC9.18□□□□□ -0.94
VPS8Q8N3P4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 AL596448.1-201ENST00000415024 392 ntBASIC9.18□□□□□ -0.94
VPS8Q8N3P4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 NME1P1-201ENST00000420914 382 ntBASIC9.18□□□□□ -0.94
VPS8Q8N3P4 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 AC006539.1-201ENST00000481419 501 ntBASIC9.18□□□□□ -0.94
VPS8Q8N3P4 AC105384.2-201ENST00000508433 640 ntBASIC9.18□□□□□ -0.94
VPS8Q8N3P4 AC139365.2-201ENST00000517972 253 ntBASIC9.18□□□□□ -0.94
VPS8Q8N3P4 HSPE1P2-201ENST00000554777 306 ntBASIC9.18□□□□□ -0.94
VPS8Q8N3P4 AC135626.1-201ENST00000556983 435 ntBASIC9.18□□□□□ -0.94
VPS8Q8N3P4 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC9.18□□□□□ -0.94
VPS8Q8N3P4 UOX-205ENST00000640983 544 ntTSL 4 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 AL117378.2-201ENST00000622916 1337 ntBASIC9.18□□□□□ -0.94
VPS8Q8N3P4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
VPS8Q8N3P4 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 ERG-202ENST00000398897 4651 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 ZNF101P1-201ENST00000435701 1720 ntBASIC9.17□□□□□ -0.94
VPS8Q8N3P4 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 AC087752.1-201ENST00000391360 558 ntBASIC9.17□□□□□ -0.94
VPS8Q8N3P4 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 AL391987.1-201ENST00000441025 200 ntBASIC9.17□□□□□ -0.94
VPS8Q8N3P4 PPIAP19-201ENST00000486414 492 ntBASIC9.17□□□□□ -0.94
VPS8Q8N3P4 RN7SL101P-201ENST00000496350 279 ntBASIC9.17□□□□□ -0.94
VPS8Q8N3P4 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 FAM27E4-201ENST00000605259 342 ntBASIC9.17□□□□□ -0.94
VPS8Q8N3P4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 LINC01963-201ENST00000562038 3148 ntBASIC9.17□□□□□ -0.94
VPS8Q8N3P4 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC9.17□□□□□ -0.94
VPS8Q8N3P4 KARSP1-201ENST00000451871 1752 ntBASIC9.16□□□□□ -0.94
VPS8Q8N3P4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
VPS8Q8N3P4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS8Q8N3P4 RNA5SP394-201ENST00000364216 119 ntBASIC9.16□□□□□ -0.94
VPS8Q8N3P4 RN7SKP69-201ENST00000365390 305 ntBASIC9.16□□□□□ -0.94
VPS8Q8N3P4 RNA5SP30-201ENST00000365552 115 ntBASIC9.16□□□□□ -0.94
VPS8Q8N3P4 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC9.16□□□□□ -0.94
VPS8Q8N3P4 AL365220.1-201ENST00000432923 399 ntBASIC9.16□□□□□ -0.94
VPS8Q8N3P4 DEFA9P-201ENST00000433042 285 ntBASIC9.16□□□□□ -0.94
VPS8Q8N3P4 USP24P1-201ENST00000433802 779 ntBASIC9.16□□□□□ -0.94
VPS8Q8N3P4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
VPS8Q8N3P4 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC9.16□□□□□ -0.94
VPS8Q8N3P4 FRG2FP-204ENST00000453982 852 ntBASIC9.16□□□□□ -0.94
VPS8Q8N3P4 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS8Q8N3P4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
VPS8Q8N3P4 AC022215.1-201ENST00000481770 362 ntBASIC9.16□□□□□ -0.94
VPS8Q8N3P4 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
VPS8Q8N3P4 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC9.16□□□□□ -0.94
VPS8Q8N3P4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC9.16□□□□□ -0.94
VPS8Q8N3P4 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
VPS8Q8N3P4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms