Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.74□□□□□ -1.33
CCDC65Q8IXS2 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 AL161912.4-201ENST00000623889 2468 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 AC123769.1-201ENST00000530992 3192 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 RNA5SP110-201ENST00000362638 115 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 RNU1-134P-201ENST00000362935 165 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 RNU1-59P-201ENST00000364829 162 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 RBBP4P5-201ENST00000398583 1266 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 RN7SKP86-201ENST00000410454 332 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 AL390879.1-201ENST00000439143 386 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 AC016027.4-201ENST00000450866 277 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 HMGB1P7-201ENST00000450921 612 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 RPL9P15-201ENST00000491096 532 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 CCDC11P1-201ENST00000503137 1162 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 AC119403.2-201ENST00000590960 598 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 U1.25-201ENST00000614085 162 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 MIR6721-201ENST00000617181 87 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 U1.34-201ENST00000618578 162 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 AL512652.1-201ENST00000619006 500 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 U1.31-201ENST00000620022 160 ntBASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CCDC65Q8IXS2 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 AC020656.2-201ENST00000613291 5309 ntBASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 RNA5SP279-201ENST00000365513 117 ntBASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 SNORA70.9-201ENST00000384370 135 ntBASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 AL096800.1-201ENST00000405326 893 ntBASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 SNORA77.2-201ENST00000408571 112 ntBASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 AC245884.2-201ENST00000426257 404 ntBASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 TRIM60P16-201ENST00000444048 694 ntBASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 PPIAP7-201ENST00000454070 489 ntBASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 AC012123.2-201ENST00000485809 248 ntBASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 AC092349.1-201ENST00000504903 310 ntBASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 AP000620.1-201ENST00000527147 504 ntBASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 AL136097.3-201ENST00000611097 505 ntBASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 FAM27E2-201ENST00000619668 403 ntBASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 AC069234.4-201ENST00000621276 412 ntBASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 AC111152.1-202ENST00000635848 339 ntBASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC65Q8IXS2 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms