Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
C9orf40Q8IXQ3 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 CASC19-238ENST00000641523 1558 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 RNFT1P3-201ENST00000340898 1052 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AL360271.1-201ENST00000395679 510 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 NMD3P2-201ENST00000421815 761 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 HMGN1P2-201ENST00000445197 310 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 RPL5P10-201ENST00000445207 894 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AC005077.1-201ENST00000449226 375 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 CFL1P4-201ENST00000451536 498 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AC008945.1-201ENST00000505144 499 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AC007956.1-201ENST00000555623 542 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AC007494.1-201ENST00000562293 760 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AC079315.1-201ENST00000602952 623 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AC004890.3-201ENST00000605566 1095 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AC108673.3-201ENST00000609183 335 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AC245014.3-201ENST00000618589 347 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AC024884.1-201ENST00000620583 399 ntBASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
C9orf40Q8IXQ3 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
C9orf40Q8IXQ3 GNL2P1-201ENST00000451274 2190 ntBASIC5.59□□□□□ -1.52
C9orf40Q8IXQ3 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.59□□□□□ -1.52
C9orf40Q8IXQ3 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.59□□□□□ -1.52
C9orf40Q8IXQ3 QRSL1P1-201ENST00000400977 1540 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AC093297.3-201ENST00000607056 2517 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 OR56A4-201ENST00000330728 1209 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 SNRPEP6-201ENST00000407465 277 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 RPL35AP3-201ENST00000414680 288 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AC245884.2-201ENST00000426257 404 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AC016027.5-201ENST00000427227 210 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 GAPDHP75-201ENST00000433910 943 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 RN7SL269P-201ENST00000467795 305 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AC083795.1-201ENST00000491760 320 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AC025458.1-201ENST00000506046 166 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 CYP4F27P-201ENST00000514557 494 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 AP003396.4-201ENST00000527574 265 ntBASIC5.58□□□□□ -1.52
C9orf40Q8IXQ3 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms