Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.46□□□□□ -1.54
SKA3Q8IX90 OR4H6P-201ENST00000563771 921 ntBASIC5.46□□□□□ -1.54
SKA3Q8IX90 RN7SL230P-201ENST00000580835 303 ntBASIC5.46□□□□□ -1.54
SKA3Q8IX90 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.46□□□□□ -1.54
SKA3Q8IX90 AL591167.1-201ENST00000607321 456 ntBASIC5.46□□□□□ -1.54
SKA3Q8IX90 AC022106.1-201ENST00000612834 766 ntBASIC5.46□□□□□ -1.54
SKA3Q8IX90 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.46□□□□□ -1.54
SKA3Q8IX90 AC116667.2-201ENST00000641075 823 ntBASIC5.46□□□□□ -1.54
SKA3Q8IX90 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SKA3Q8IX90 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SKA3Q8IX90 AP000473.2-201ENST00000602659 1537 ntBASIC5.46□□□□□ -1.54
SKA3Q8IX90 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SKA3Q8IX90 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SKA3Q8IX90 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SKA3Q8IX90 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SKA3Q8IX90 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SKA3Q8IX90 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SKA3Q8IX90 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
SKA3Q8IX90 AC096921.2-201ENST00000561507 1916 ntBASIC5.46□□□□□ -1.54
SKA3Q8IX90 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.46□□□□□ -1.54
SKA3Q8IX90 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.46□□□□□ -1.54
SKA3Q8IX90 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SKA3Q8IX90 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SKA3Q8IX90 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SKA3Q8IX90 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SKA3Q8IX90 AC092451.3-201ENST00000625067 1343 ntBASIC5.46□□□□□ -1.54
SKA3Q8IX90 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.46□□□□□ -1.54
SKA3Q8IX90 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SKA3Q8IX90 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SKA3Q8IX90 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SKA3Q8IX90 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 HDAC1P2-201ENST00000453661 1398 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 AC092692.1-201ENST00000623625 2595 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SKA3Q8IX90 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SKA3Q8IX90 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SKA3Q8IX90 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SKA3Q8IX90 SNORA43.1-201ENST00000364863 140 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 MIR188-201ENST00000385034 86 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 REREP1Y-201ENST00000422655 198 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 AL139158.1-201ENST00000424719 340 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 AC099782.1-201ENST00000425889 474 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 REREP2Y-201ENST00000439103 200 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 HIGD1AP16-201ENST00000450986 258 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 AC073594.1-201ENST00000462065 364 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 AC090142.2-201ENST00000483263 416 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 AC012123.2-201ENST00000485809 248 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 RPL34P33-201ENST00000486062 334 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 RN7SL568P-201ENST00000493069 298 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 SNX18P24-201ENST00000505249 671 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 SNX18P25-201ENST00000510539 758 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 Y_RNA.710-201ENST00000516975 110 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 NPIPB14P-203ENST00000532298 987 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 AC036111.2-201ENST00000533247 901 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 RPA2P3-201ENST00000533268 770 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SKA3Q8IX90 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 AC007066.2-202ENST00000566531 914 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SKA3Q8IX90 DYNLL1P1-201ENST00000595442 269 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 RPL12P48-201ENST00000605620 304 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 AL137246.1-201ENST00000607072 977 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 AL135999.3-201ENST00000610501 812 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SKA3Q8IX90 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SKA3Q8IX90 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SKA3Q8IX90 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SKA3Q8IX90 ZNF101P1-201ENST00000435701 1720 ntBASIC5.45□□□□□ -1.54
SKA3Q8IX90 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SKA3Q8IX90 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SKA3Q8IX90 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.45□□□□□ -1.54
SKA3Q8IX90 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SKA3Q8IX90 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SKA3Q8IX90 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SKA3Q8IX90 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
SKA3Q8IX90 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SKA3Q8IX90 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SKA3Q8IX90 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.44□□□□□ -1.54
SKA3Q8IX90 AL442128.2-201ENST00000620246 1824 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms