Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AC126915.2-201ENST00000610957 190 ntBASIC5.86□□□□□ -1.47
RIF1Q5UIP0 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AL445528.2-201ENST00000620582 470 ntBASIC5.86□□□□□ -1.47
RIF1Q5UIP0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AC073869.10-201ENST00000642016 354 ntBASIC5.86□□□□□ -1.47
RIF1Q5UIP0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.86□□□□□ -1.47
RIF1Q5UIP0 AC015871.4-201ENST00000624650 2260 ntBASIC5.86□□□□□ -1.47
RIF1Q5UIP0 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 AF254983.1-201ENST00000612267 3336 ntTSL 5 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 AC012360.3-201ENST00000610036 3449 ntBASIC5.85□□□□□ -1.47
RIF1Q5UIP0 RPL17P50-201ENST00000396131 546 ntBASIC5.85□□□□□ -1.47
RIF1Q5UIP0 AC073648.4-201ENST00000442655 781 ntBASIC5.85□□□□□ -1.47
RIF1Q5UIP0 GAPDHP23-201ENST00000444823 993 ntBASIC5.85□□□□□ -1.47
RIF1Q5UIP0 RPS23P9-201ENST00000448848 438 ntBASIC5.85□□□□□ -1.47
RIF1Q5UIP0 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 BNIP3P1-201ENST00000547295 580 ntBASIC5.85□□□□□ -1.47
RIF1Q5UIP0 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.85□□□□□ -1.47
RIF1Q5UIP0 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 MAPK10-371ENST00000641952 5209 ntBASIC5.85□□□□□ -1.47
RIF1Q5UIP0 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 AL096829.1-201ENST00000413677 457 ntBASIC5.85□□□□□ -1.47
RIF1Q5UIP0 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 AC009237.1-201ENST00000442127 744 ntBASIC5.85□□□□□ -1.47
RIF1Q5UIP0 AC106800.2-201ENST00000514009 1103 ntBASIC5.85□□□□□ -1.47
RIF1Q5UIP0 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 OR7A1P-202ENST00000641542 1158 ntBASIC5.85□□□□□ -1.47
RIF1Q5UIP0 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.85□□□□□ -1.47
RIF1Q5UIP0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
RIF1Q5UIP0 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RIF1Q5UIP0 AC022819.1-201ENST00000563495 3910 ntBASIC5.84□□□□□ -1.47
RIF1Q5UIP0 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RIF1Q5UIP0 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RIF1Q5UIP0 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
RIF1Q5UIP0 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RIF1Q5UIP0 RN7SKP77-201ENST00000363261 353 ntBASIC5.84□□□□□ -1.47
RIF1Q5UIP0 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RIF1Q5UIP0 RN7SKP166-201ENST00000410812 305 ntBASIC5.84□□□□□ -1.47
RIF1Q5UIP0 PSMC1P2-201ENST00000423961 1204 ntBASIC5.84□□□□□ -1.47
RIF1Q5UIP0 RPL7P56-201ENST00000429441 717 ntBASIC5.84□□□□□ -1.47
RIF1Q5UIP0 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.84□□□□□ -1.47
RIF1Q5UIP0 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RIF1Q5UIP0 AC009120.3-201ENST00000563335 499 ntBASIC5.84□□□□□ -1.47
RIF1Q5UIP0 AC136624.4-201ENST00000573044 370 ntBASIC5.84□□□□□ -1.47
RIF1Q5UIP0 AC007204.2-201ENST00000615022 616 ntBASIC5.84□□□□□ -1.47
RIF1Q5UIP0 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.84□□□□□ -1.47
RIF1Q5UIP0 AP004289.1-201ENST00000436307 2205 ntBASIC5.84□□□□□ -1.47
RIF1Q5UIP0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.84□□□□□ -1.47
RIF1Q5UIP0 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.84□□□□□ -1.48
RIF1Q5UIP0 KIF4CP-201ENST00000422742 1279 ntBASIC5.84□□□□□ -1.48
RIF1Q5UIP0 PRPF38AP2-201ENST00000438179 851 ntBASIC5.84□□□□□ -1.48
RIF1Q5UIP0 RPL31P44-201ENST00000447680 377 ntBASIC5.84□□□□□ -1.48
RIF1Q5UIP0 AC092967.1-201ENST00000449016 481 ntBASIC5.84□□□□□ -1.48
RIF1Q5UIP0 PDCL3P4-201ENST00000489621 720 ntBASIC5.84□□□□□ -1.48
RIF1Q5UIP0 AC100784.1-201ENST00000522790 310 ntBASIC5.84□□□□□ -1.48
RIF1Q5UIP0 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.84□□□□□ -1.48
RIF1Q5UIP0 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.84□□□□□ -1.48
RIF1Q5UIP0 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.84□□□□□ -1.48
RIF1Q5UIP0 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.84□□□□□ -1.48
RIF1Q5UIP0 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RIF1Q5UIP0 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC5.84□□□□□ -1.48
RIF1Q5UIP0 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RIF1Q5UIP0 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
RIF1Q5UIP0 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RIF1Q5UIP0 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RIF1Q5UIP0 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RIF1Q5UIP0 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RIF1Q5UIP0 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
RIF1Q5UIP0 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms