Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC009163.6-201ENST00000612367 342 ntBASIC5.22□□□□□ -1.57
LRRK2Q5S007 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 AC091953.3-201ENST00000623220 236 ntBASIC5.22□□□□□ -1.57
LRRK2Q5S007 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 HDAC1P2-201ENST00000453661 1398 ntBASIC5.22□□□□□ -1.57
LRRK2Q5S007 MAPK10-371ENST00000641952 5209 ntBASIC5.22□□□□□ -1.57
LRRK2Q5S007 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRRK2Q5S007 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LRRK2Q5S007 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRRK2Q5S007 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRRK2Q5S007 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 GNL2P1-201ENST00000451274 2190 ntBASIC5.22□□□□□ -1.57
LRRK2Q5S007 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRRK2Q5S007 YES1P1-201ENST00000418510 1628 ntBASIC5.22□□□□□ -1.57
LRRK2Q5S007 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 AC025809.2-201ENST00000625085 1802 ntBASIC5.22□□□□□ -1.57
LRRK2Q5S007 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRRK2Q5S007 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRRK2Q5S007 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRRK2Q5S007 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRRK2Q5S007 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 AC006466.1-201ENST00000438721 289 ntBASIC5.22□□□□□ -1.57
LRRK2Q5S007 AC009237.1-201ENST00000442127 744 ntBASIC5.22□□□□□ -1.57
LRRK2Q5S007 AC013399.1-201ENST00000450311 418 ntBASIC5.22□□□□□ -1.57
LRRK2Q5S007 RPS21P4-201ENST00000487122 248 ntBASIC5.22□□□□□ -1.57
LRRK2Q5S007 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 AC063949.1-201ENST00000552900 865 ntBASIC5.22□□□□□ -1.57
LRRK2Q5S007 MIR1254-2-201ENST00000579553 63 ntBASIC5.22□□□□□ -1.57
LRRK2Q5S007 AC068831.8-201ENST00000620171 435 ntBASIC5.22□□□□□ -1.57
LRRK2Q5S007 AL137067.2-201ENST00000621202 131 ntBASIC5.22□□□□□ -1.57
LRRK2Q5S007 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.22□□□□□ -1.57
LRRK2Q5S007 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRRK2Q5S007 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
LRRK2Q5S007 OR7E25P-202ENST00000641088 5937 ntBASIC5.21□□□□□ -1.57
LRRK2Q5S007 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
LRRK2Q5S007 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.21□□□□□ -1.57
LRRK2Q5S007 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LRRK2Q5S007 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.21□□□□□ -1.57
LRRK2Q5S007 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.57
LRRK2Q5S007 AC024651.2-201ENST00000562480 2098 ntBASIC5.21□□□□□ -1.57
LRRK2Q5S007 AC131971.1-201ENST00000332881 1482 ntBASIC5.21□□□□□ -1.58
LRRK2Q5S007 RN7SKP104-201ENST00000362605 328 ntBASIC5.21□□□□□ -1.58
LRRK2Q5S007 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 AL096829.1-201ENST00000413677 457 ntBASIC5.21□□□□□ -1.58
LRRK2Q5S007 KIF4CP-201ENST00000422742 1279 ntBASIC5.21□□□□□ -1.58
LRRK2Q5S007 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRRK2Q5S007 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRRK2Q5S007 RPA2P3-201ENST00000533268 770 ntBASIC5.21□□□□□ -1.58
LRRK2Q5S007 BNIP3P1-201ENST00000547295 580 ntBASIC5.21□□□□□ -1.58
LRRK2Q5S007 TXNP4-201ENST00000575018 310 ntBASIC5.21□□□□□ -1.58
LRRK2Q5S007 AC027229.1-201ENST00000583887 253 ntBASIC5.21□□□□□ -1.58
LRRK2Q5S007 MIR7703-201ENST00000620784 77 ntBASIC5.21□□□□□ -1.58
LRRK2Q5S007 AP000346.3-201ENST00000622821 210 ntBASIC5.21□□□□□ -1.58
LRRK2Q5S007 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 AC112255.1-201ENST00000624070 2493 ntBASIC5.21□□□□□ -1.58
LRRK2Q5S007 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRRK2Q5S007 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRRK2Q5S007 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRRK2Q5S007 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRRK2Q5S007 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRRK2Q5S007 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRRK2Q5S007 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 CD86-209ENST00000493101 1572 ntTSL 2 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 AC012618.3-205ENST00000637896 1496 ntBASIC5.21□□□□□ -1.58
LRRK2Q5S007 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRRK2Q5S007 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRRK2Q5S007 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRRK2Q5S007 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRRK2Q5S007 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRRK2Q5S007 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRRK2Q5S007 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 RPS3AP41-201ENST00000462701 778 ntBASIC5.21□□□□□ -1.58
LRRK2Q5S007 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 AP002799.1-201ENST00000623552 423 ntBASIC5.21□□□□□ -1.58
LRRK2Q5S007 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRRK2Q5S007 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms