Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.97□□□□□ -1.29
CCNA1P78396 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCNA1P78396 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.97□□□□□ -1.29
CCNA1P78396 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.97□□□□□ -1.29
CCNA1P78396 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCNA1P78396 AC123769.1-201ENST00000530992 3192 ntBASIC6.97□□□□□ -1.29
CCNA1P78396 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.97□□□□□ -1.29
CCNA1P78396 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CCNA1P78396 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
CCNA1P78396 AL354890.1-201ENST00000413730 346 ntBASIC6.97□□□□□ -1.29
CCNA1P78396 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCNA1P78396 RPS15AP30-201ENST00000420976 390 ntBASIC6.97□□□□□ -1.29
CCNA1P78396 AK3P5-201ENST00000432033 519 ntBASIC6.97□□□□□ -1.29
CCNA1P78396 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCNA1P78396 AC092967.1-201ENST00000449016 481 ntBASIC6.97□□□□□ -1.29
CCNA1P78396 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.97□□□□□ -1.29
CCNA1P78396 RN7SL284P-201ENST00000498823 275 ntBASIC6.97□□□□□ -1.29
CCNA1P78396 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.97□□□□□ -1.29
CCNA1P78396 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.97□□□□□ -1.29
CCNA1P78396 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.97□□□□□ -1.29
CCNA1P78396 AL356801.1-201ENST00000559320 294 ntBASIC6.97□□□□□ -1.29
CCNA1P78396 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.97□□□□□ -1.29
CCNA1P78396 MIR5095-201ENST00000578844 88 ntBASIC6.97□□□□□ -1.29
CCNA1P78396 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.97□□□□□ -1.29
CCNA1P78396 AC013244.1-201ENST00000604279 193 ntBASIC6.97□□□□□ -1.29
CCNA1P78396 FAM27E4-201ENST00000605259 342 ntBASIC6.97□□□□□ -1.29
CCNA1P78396 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.97□□□□□ -1.29
CCNA1P78396 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCNA1P78396 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.97□□□□□ -1.29
CCNA1P78396 MIR193BHG-214ENST00000641765 509 ntBASIC6.97□□□□□ -1.29
CCNA1P78396 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.97□□□□□ -1.29
CCNA1P78396 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.97□□□□□ -1.29
CCNA1P78396 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.97□□□□□ -1.29
CCNA1P78396 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCNA1P78396 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCNA1P78396 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCNA1P78396 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.97□□□□□ -1.29
CCNA1P78396 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CCNA1P78396 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCNA1P78396 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.97□□□□□ -1.29
CCNA1P78396 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CCNA1P78396 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CCNA1P78396 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.96□□□□□ -1.29
CCNA1P78396 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
CCNA1P78396 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
CCNA1P78396 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CCNA1P78396 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.96□□□□□ -1.29
CCNA1P78396 AL031651.1-201ENST00000615357 1438 ntBASIC6.96□□□□□ -1.3
CCNA1P78396 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCNA1P78396 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCNA1P78396 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CCNA1P78396 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CCNA1P78396 RN7SKP128-201ENST00000364270 303 ntBASIC6.96□□□□□ -1.3
CCNA1P78396 RNU11-6P-201ENST00000391127 133 ntBASIC6.96□□□□□ -1.3
CCNA1P78396 AC016739.1-201ENST00000405359 345 ntBASIC6.96□□□□□ -1.3
CCNA1P78396 RPL35AP3-201ENST00000414680 288 ntBASIC6.96□□□□□ -1.3
CCNA1P78396 RPS14P4-201ENST00000415880 418 ntBASIC6.96□□□□□ -1.3
CCNA1P78396 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.96□□□□□ -1.3
CCNA1P78396 AP000281.1-201ENST00000444036 316 ntBASIC6.96□□□□□ -1.3
CCNA1P78396 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCNA1P78396 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.96□□□□□ -1.3
CCNA1P78396 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.96□□□□□ -1.3
CCNA1P78396 RN7SL269P-201ENST00000467795 305 ntBASIC6.96□□□□□ -1.3
CCNA1P78396 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.96□□□□□ -1.3
CCNA1P78396 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.96□□□□□ -1.3
CCNA1P78396 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCNA1P78396 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.96□□□□□ -1.3
CCNA1P78396 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.96□□□□□ -1.3
CCNA1P78396 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.96□□□□□ -1.3
CCNA1P78396 AC110056.1-201ENST00000525759 911 ntBASIC6.96□□□□□ -1.3
CCNA1P78396 AP000662.1-201ENST00000530952 487 ntBASIC6.96□□□□□ -1.3
CCNA1P78396 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.96□□□□□ -1.3
CCNA1P78396 AC073916.1-201ENST00000545095 130 ntBASIC6.96□□□□□ -1.3
CCNA1P78396 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.96□□□□□ -1.3
CCNA1P78396 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.96□□□□□ -1.3
CCNA1P78396 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CCNA1P78396 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCNA1P78396 AC027229.1-201ENST00000583887 253 ntBASIC6.96□□□□□ -1.3
CCNA1P78396 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCNA1P78396 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.96□□□□□ -1.3
CCNA1P78396 AL137067.2-201ENST00000621202 131 ntBASIC6.96□□□□□ -1.3
CCNA1P78396 AC013488.1-201ENST00000526618 1838 ntBASIC6.96□□□□□ -1.3
CCNA1P78396 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.96□□□□□ -1.3
CCNA1P78396 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCNA1P78396 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCNA1P78396 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.96□□□□□ -1.3
CCNA1P78396 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCNA1P78396 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.95□□□□□ -1.3
CCNA1P78396 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCNA1P78396 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCNA1P78396 AC024587.1-201ENST00000505925 2157 ntBASIC6.95□□□□□ -1.3
CCNA1P78396 AC006213.6-201ENST00000623722 4179 ntBASIC6.95□□□□□ -1.3
CCNA1P78396 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCNA1P78396 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCNA1P78396 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.95□□□□□ -1.3
CCNA1P78396 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CCNA1P78396 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.95□□□□□ -1.3
CCNA1P78396 BMS1P13-201ENST00000417301 885 ntBASIC6.95□□□□□ -1.3
CCNA1P78396 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.95□□□□□ -1.3
CCNA1P78396 AC093155.2-201ENST00000420734 937 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms