Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBA52P62987 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBA52P62987 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5.33□□□□□ -1.56
UBA52P62987 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBA52P62987 AP000473.2-201ENST00000602659 1537 ntBASIC5.33□□□□□ -1.56
UBA52P62987 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.33□□□□□ -1.56
UBA52P62987 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UBA52P62987 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBA52P62987 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.32□□□□□ -1.56
UBA52P62987 AC092692.1-201ENST00000623625 2595 ntBASIC5.32□□□□□ -1.56
UBA52P62987 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.32□□□□□ -1.56
UBA52P62987 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
UBA52P62987 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBA52P62987 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UBA52P62987 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.32□□□□□ -1.56
UBA52P62987 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
UBA52P62987 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBA52P62987 SNORD1C-201ENST00000363315 78 ntBASIC5.32□□□□□ -1.56
UBA52P62987 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.32□□□□□ -1.56
UBA52P62987 CYP4F30P-202ENST00000420048 405 ntBASIC5.32□□□□□ -1.56
UBA52P62987 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.32□□□□□ -1.56
UBA52P62987 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.32□□□□□ -1.56
UBA52P62987 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.32□□□□□ -1.56
UBA52P62987 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.32□□□□□ -1.56
UBA52P62987 KRT8P51-201ENST00000438938 274 ntBASIC5.32□□□□□ -1.56
UBA52P62987 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
UBA52P62987 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.32□□□□□ -1.56
UBA52P62987 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.32□□□□□ -1.56
UBA52P62987 AL020997.1-201ENST00000446554 349 ntBASIC5.32□□□□□ -1.56
UBA52P62987 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.32□□□□□ -1.56
UBA52P62987 OR2AF1P-201ENST00000454899 889 ntBASIC5.32□□□□□ -1.56
UBA52P62987 OSTCP1-201ENST00000455507 450 ntBASIC5.32□□□□□ -1.56
UBA52P62987 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.32□□□□□ -1.56
UBA52P62987 RARRES2P3-201ENST00000457739 473 ntBASIC5.32□□□□□ -1.56
UBA52P62987 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.32□□□□□ -1.56
UBA52P62987 AC091965.3-201ENST00000506236 208 ntBASIC5.32□□□□□ -1.56
UBA52P62987 OR52H2P-201ENST00000514607 902 ntBASIC5.32□□□□□ -1.56
UBA52P62987 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.32□□□□□ -1.56
UBA52P62987 SNORA70.11-201ENST00000515987 138 ntBASIC5.32□□□□□ -1.56
UBA52P62987 SNORA70.13-201ENST00000516116 138 ntBASIC5.32□□□□□ -1.56
UBA52P62987 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.32□□□□□ -1.56
UBA52P62987 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.32□□□□□ -1.56
UBA52P62987 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.32□□□□□ -1.56
UBA52P62987 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.32□□□□□ -1.56
UBA52P62987 AC002519.2-203ENST00000567043 837 ntBASIC5.32□□□□□ -1.56
UBA52P62987 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.32□□□□□ -1.56
UBA52P62987 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.32□□□□□ -1.56
UBA52P62987 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBA52P62987 AL589863.1-201ENST00000595383 631 ntBASIC5.32□□□□□ -1.56
UBA52P62987 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.32□□□□□ -1.56
UBA52P62987 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.32□□□□□ -1.56
UBA52P62987 AC245052.7-201ENST00000601161 359 ntBASIC5.32□□□□□ -1.56
UBA52P62987 BUB1P1-201ENST00000603541 607 ntBASIC5.32□□□□□ -1.56
UBA52P62987 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.32□□□□□ -1.56
UBA52P62987 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.32□□□□□ -1.56
UBA52P62987 AC008691.1-209ENST00000642094 814 ntBASIC5.32□□□□□ -1.56
UBA52P62987 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.32□□□□□ -1.56
UBA52P62987 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
UBA52P62987 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.32□□□□□ -1.56
UBA52P62987 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBA52P62987 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
UBA52P62987 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBA52P62987 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UBA52P62987 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
UBA52P62987 AC109446.4-201ENST00000623235 2755 ntBASIC5.32□□□□□ -1.56
UBA52P62987 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UBA52P62987 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBA52P62987 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
UBA52P62987 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.32□□□□□ -1.56
UBA52P62987 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UBA52P62987 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.31□□□□□ -1.56
UBA52P62987 AC013268.3-201ENST00000262716 2324 ntBASIC5.31□□□□□ -1.56
UBA52P62987 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UBA52P62987 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.31□□□□□ -1.56
UBA52P62987 AL121768.1-201ENST00000613917 2544 ntBASIC5.31□□□□□ -1.56
UBA52P62987 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
UBA52P62987 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UBA52P62987 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
UBA52P62987 AC022325.1-201ENST00000502748 2199 ntBASIC5.31□□□□□ -1.56
UBA52P62987 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UBA52P62987 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.31□□□□□ -1.56
UBA52P62987 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.31□□□□□ -1.56
UBA52P62987 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
UBA52P62987 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
UBA52P62987 RPL11P4-201ENST00000332269 436 ntBASIC5.31□□□□□ -1.56
UBA52P62987 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
UBA52P62987 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
UBA52P62987 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UBA52P62987 MRPS6P2-201ENST00000381143 370 ntBASIC5.31□□□□□ -1.56
UBA52P62987 AL929472.1-201ENST00000417484 429 ntBASIC5.31□□□□□ -1.56
UBA52P62987 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.31□□□□□ -1.56
UBA52P62987 AK3P5-201ENST00000432033 519 ntBASIC5.31□□□□□ -1.56
UBA52P62987 GTF3AP6-201ENST00000432585 986 ntBASIC5.31□□□□□ -1.56
UBA52P62987 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.31□□□□□ -1.56
UBA52P62987 COX4I1P2-201ENST00000447446 547 ntBASIC5.31□□□□□ -1.56
UBA52P62987 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
UBA52P62987 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.31□□□□□ -1.56
UBA52P62987 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.31□□□□□ -1.56
UBA52P62987 RN7SL254P-201ENST00000460609 284 ntBASIC5.31□□□□□ -1.56
UBA52P62987 NPM1P28-201ENST00000492269 840 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms