Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 RN7SL352P-201ENST00000466002 277 ntBASIC5.97□□□□□ -1.45
CDH13P55290 SEPT7P6-201ENST00000469999 1143 ntBASIC5.97□□□□□ -1.45
CDH13P55290 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH13P55290 AC022730.1-201ENST00000473114 568 ntBASIC5.97□□□□□ -1.45
CDH13P55290 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH13P55290 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH13P55290 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH13P55290 AC114324.2-202ENST00000503812 134 ntBASIC5.97□□□□□ -1.45
CDH13P55290 KHDC1P1-201ENST00000511053 508 ntBASIC5.97□□□□□ -1.45
CDH13P55290 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH13P55290 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH13P55290 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH13P55290 CYCSP25-201ENST00000525280 316 ntBASIC5.97□□□□□ -1.45
CDH13P55290 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH13P55290 AC124891.1-201ENST00000536322 519 ntBASIC5.97□□□□□ -1.45
CDH13P55290 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH13P55290 TDGP1-201ENST00000543961 1229 ntBASIC5.97□□□□□ -1.45
CDH13P55290 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
CDH13P55290 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH13P55290 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH13P55290 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CDH13P55290 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.97□□□□□ -1.45
CDH13P55290 AC008555.7-201ENST00000605008 583 ntBASIC5.97□□□□□ -1.45
CDH13P55290 AC141002.1-201ENST00000607025 279 ntBASIC5.97□□□□□ -1.45
CDH13P55290 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH13P55290 MIR6885-201ENST00000612241 66 ntBASIC5.97□□□□□ -1.45
CDH13P55290 AC016911.1-201ENST00000613297 452 ntBASIC5.97□□□□□ -1.45
CDH13P55290 GAPDHP41-201ENST00000613707 975 ntBASIC5.97□□□□□ -1.45
CDH13P55290 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
CDH13P55290 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH13P55290 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CDH13P55290 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH13P55290 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH13P55290 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CDH13P55290 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
CDH13P55290 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CDH13P55290 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.97□□□□□ -1.45
CDH13P55290 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
CDH13P55290 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.97□□□□□ -1.45
CDH13P55290 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH13P55290 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH13P55290 EIF3EP1-201ENST00000433978 1316 ntBASIC5.97□□□□□ -1.45
CDH13P55290 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CDH13P55290 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CDH13P55290 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
CDH13P55290 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.97□□□□□ -1.45
CDH13P55290 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
CDH13P55290 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
CDH13P55290 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.45
CDH13P55290 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
CDH13P55290 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.96□□□□□ -1.45
CDH13P55290 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH13P55290 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CDH13P55290 AC018717.1-201ENST00000457712 1505 ntBASIC5.96□□□□□ -1.46
CDH13P55290 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH13P55290 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH13P55290 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH13P55290 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH13P55290 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH13P55290 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH13P55290 RNU6-316P-201ENST00000391027 107 ntBASIC5.96□□□□□ -1.46
CDH13P55290 SNORA77.2-201ENST00000408571 112 ntBASIC5.96□□□□□ -1.46
CDH13P55290 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.96□□□□□ -1.46
CDH13P55290 AC094019.1-201ENST00000434678 472 ntBASIC5.96□□□□□ -1.46
CDH13P55290 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CDH13P55290 HIGD1AP16-201ENST00000450986 258 ntBASIC5.96□□□□□ -1.46
CDH13P55290 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH13P55290 AC124945.1-201ENST00000485133 188 ntBASIC5.96□□□□□ -1.46
CDH13P55290 AC018639.1-201ENST00000492994 442 ntBASIC5.96□□□□□ -1.46
CDH13P55290 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH13P55290 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH13P55290 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH13P55290 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH13P55290 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH13P55290 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.96□□□□□ -1.46
CDH13P55290 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH13P55290 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.96□□□□□ -1.46
CDH13P55290 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
CDH13P55290 AC091167.5-201ENST00000605689 894 ntBASIC5.96□□□□□ -1.46
CDH13P55290 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH13P55290 AC211486.4-201ENST00000621495 113 ntBASIC5.96□□□□□ -1.46
CDH13P55290 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.96□□□□□ -1.46
CDH13P55290 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.96□□□□□ -1.46
CDH13P55290 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH13P55290 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.96□□□□□ -1.46
CDH13P55290 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.96□□□□□ -1.46
CDH13P55290 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH13P55290 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CDH13P55290 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CDH13P55290 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH13P55290 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH13P55290 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH13P55290 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH13P55290 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH13P55290 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH13P55290 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH13P55290 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH13P55290 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH13P55290 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms