Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH6P55285 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.26□□□□□ -1.41
CDH6P55285 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDH6P55285 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.26□□□□□ -1.41
CDH6P55285 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH6P55285 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.26□□□□□ -1.41
CDH6P55285 AC073333.2-201ENST00000603589 769 ntBASIC6.26□□□□□ -1.41
CDH6P55285 AC092681.3-201ENST00000609463 678 ntBASIC6.26□□□□□ -1.41
CDH6P55285 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.26□□□□□ -1.41
CDH6P55285 MIR6721-201ENST00000617181 87 ntBASIC6.26□□□□□ -1.41
CDH6P55285 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.26□□□□□ -1.41
CDH6P55285 CASC19-274ENST00000642018 970 ntBASIC6.26□□□□□ -1.41
CDH6P55285 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH6P55285 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CDH6P55285 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.26□□□□□ -1.41
CDH6P55285 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDH6P55285 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CDH6P55285 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.25□□□□□ -1.41
CDH6P55285 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH6P55285 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
CDH6P55285 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CDH6P55285 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH6P55285 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH6P55285 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH6P55285 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH6P55285 RN7SKP171-201ENST00000364417 303 ntBASIC6.25□□□□□ -1.41
CDH6P55285 RNA5SP279-201ENST00000365513 117 ntBASIC6.25□□□□□ -1.41
CDH6P55285 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH6P55285 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
CDH6P55285 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.25□□□□□ -1.41
CDH6P55285 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH6P55285 AC023141.3-201ENST00000436698 278 ntBASIC6.25□□□□□ -1.41
CDH6P55285 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH6P55285 RPL5P7-201ENST00000444235 813 ntBASIC6.25□□□□□ -1.41
CDH6P55285 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH6P55285 FTLP8-201ENST00000446770 267 ntBASIC6.25□□□□□ -1.41
CDH6P55285 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH6P55285 PPIAP7-201ENST00000454070 489 ntBASIC6.25□□□□□ -1.41
CDH6P55285 YRDCP3-201ENST00000456507 480 ntBASIC6.25□□□□□ -1.41
CDH6P55285 OR7E99P-201ENST00000505750 922 ntBASIC6.25□□□□□ -1.41
CDH6P55285 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH6P55285 AC018797.1-201ENST00000510791 255 ntBASIC6.25□□□□□ -1.41
CDH6P55285 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH6P55285 RN7SKP183-201ENST00000517169 324 ntBASIC6.25□□□□□ -1.41
CDH6P55285 AP000620.1-201ENST00000527147 504 ntBASIC6.25□□□□□ -1.41
CDH6P55285 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH6P55285 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.25□□□□□ -1.41
CDH6P55285 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.25□□□□□ -1.41
CDH6P55285 AC007346.1-201ENST00000569208 867 ntBASIC6.25□□□□□ -1.41
CDH6P55285 MIR3154-201ENST00000577829 84 ntBASIC6.25□□□□□ -1.41
CDH6P55285 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH6P55285 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.25□□□□□ -1.41
CDH6P55285 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.25□□□□□ -1.41
CDH6P55285 PPBPP2-201ENST00000513150 1362 ntBASIC6.25□□□□□ -1.41
CDH6P55285 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
CDH6P55285 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.25□□□□□ -1.41
CDH6P55285 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.25□□□□□ -1.41
CDH6P55285 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH6P55285 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH6P55285 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CDH6P55285 MTCO1P28-201ENST00000574177 1528 ntBASIC6.25□□□□□ -1.41
CDH6P55285 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.25□□□□□ -1.41
CDH6P55285 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CDH6P55285 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CDH6P55285 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.24□□□□□ -1.41
CDH6P55285 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDH6P55285 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CDH6P55285 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH6P55285 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CDH6P55285 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
CDH6P55285 RNA5SP232-201ENST00000364144 119 ntBASIC6.24□□□□□ -1.41
CDH6P55285 MYL6P5-201ENST00000412707 459 ntBASIC6.24□□□□□ -1.41
CDH6P55285 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH6P55285 NMD3P2-201ENST00000421815 761 ntBASIC6.24□□□□□ -1.41
CDH6P55285 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH6P55285 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CDH6P55285 AC093166.3-201ENST00000448785 303 ntBASIC6.24□□□□□ -1.41
CDH6P55285 OR52I1-201ENST00000450052 1050 ntBASIC6.24□□□□□ -1.41
CDH6P55285 SDC4P-201ENST00000453285 601 ntBASIC6.24□□□□□ -1.41
CDH6P55285 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC6.24□□□□□ -1.41
CDH6P55285 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDH6P55285 AC083795.1-201ENST00000491760 320 ntBASIC6.24□□□□□ -1.41
CDH6P55285 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
CDH6P55285 RN7SKP288-201ENST00000516227 268 ntBASIC6.24□□□□□ -1.41
CDH6P55285 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH6P55285 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.24□□□□□ -1.41
CDH6P55285 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH6P55285 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH6P55285 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.24□□□□□ -1.41
CDH6P55285 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.24□□□□□ -1.41
CDH6P55285 OR1E3-201ENST00000575608 948 ntBASIC6.24□□□□□ -1.41
CDH6P55285 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.24□□□□□ -1.41
CDH6P55285 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH6P55285 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.24□□□□□ -1.41
CDH6P55285 FAM27E2-201ENST00000619668 403 ntBASIC6.24□□□□□ -1.41
CDH6P55285 AL357562.1-201ENST00000624911 609 ntBASIC6.24□□□□□ -1.41
CDH6P55285 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.24□□□□□ -1.41
CDH6P55285 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDH6P55285 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.24□□□□□ -1.41
CDH6P55285 THAP12P9-201ENST00000503971 2360 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms