Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNU6-729P-201ENST00000384399 107 ntBASIC6.68□□□□□ -1.34
NEK3P51956 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
NEK3P51956 RN7SKP221-201ENST00000410420 301 ntBASIC6.68□□□□□ -1.34
NEK3P51956 RNU2-22P-201ENST00000411266 212 ntBASIC6.68□□□□□ -1.34
NEK3P51956 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.68□□□□□ -1.34
NEK3P51956 RPL7AP51-201ENST00000422016 760 ntBASIC6.68□□□□□ -1.34
NEK3P51956 GPN3P1-201ENST00000423883 535 ntBASIC6.68□□□□□ -1.34
NEK3P51956 AC234771.2-201ENST00000445718 597 ntBASIC6.68□□□□□ -1.34
NEK3P51956 AC091544.1-201ENST00000484702 348 ntBASIC6.68□□□□□ -1.34
NEK3P51956 RPL29P23-201ENST00000486188 442 ntBASIC6.68□□□□□ -1.34
NEK3P51956 AL117692.1-201ENST00000494283 713 ntBASIC6.68□□□□□ -1.34
NEK3P51956 AC116917.1-201ENST00000520558 305 ntBASIC6.68□□□□□ -1.34
NEK3P51956 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC6.68□□□□□ -1.34
NEK3P51956 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.68□□□□□ -1.34
NEK3P51956 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.68□□□□□ -1.34
NEK3P51956 AC106785.4-201ENST00000569492 412 ntBASIC6.68□□□□□ -1.34
NEK3P51956 AC005242.1-201ENST00000585658 438 ntBASIC6.68□□□□□ -1.34
NEK3P51956 AC011921.2-201ENST00000589465 152 ntBASIC6.68□□□□□ -1.34
NEK3P51956 AC011500.1-201ENST00000601963 469 ntBASIC6.68□□□□□ -1.34
NEK3P51956 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.68□□□□□ -1.34
NEK3P51956 MTCO3P22-201ENST00000603219 784 ntBASIC6.68□□□□□ -1.34
NEK3P51956 SNORD96A-201ENST00000606577 79 ntBASIC6.68□□□□□ -1.34
NEK3P51956 AC004241.2-201ENST00000614562 444 ntBASIC6.68□□□□□ -1.34
NEK3P51956 AC004836.1-201ENST00000623032 634 ntBASIC6.68□□□□□ -1.34
NEK3P51956 FO681491.1-202ENST00000623392 737 ntBASIC6.68□□□□□ -1.34
NEK3P51956 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.68□□□□□ -1.34
NEK3P51956 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.68□□□□□ -1.34
NEK3P51956 OR5AC4P-202ENST00000642086 985 ntBASIC6.68□□□□□ -1.34
NEK3P51956 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
NEK3P51956 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEK3P51956 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.68□□□□□ -1.34
NEK3P51956 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.68□□□□□ -1.34
NEK3P51956 SMG1P5-202ENST00000529428 4219 ntBASIC6.68□□□□□ -1.34
NEK3P51956 SMG1P2-201ENST00000566127 4221 ntBASIC6.68□□□□□ -1.34
NEK3P51956 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NEK3P51956 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
NEK3P51956 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEK3P51956 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
NEK3P51956 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEK3P51956 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
NEK3P51956 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.68□□□□□ -1.34
NEK3P51956 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
NEK3P51956 IMMTP1-201ENST00000435590 2219 ntBASIC6.68□□□□□ -1.34
NEK3P51956 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEK3P51956 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.68□□□□□ -1.34
NEK3P51956 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEK3P51956 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.67□□□□□ -1.34
NEK3P51956 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.67□□□□□ -1.34
NEK3P51956 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.67□□□□□ -1.34
NEK3P51956 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.67□□□□□ -1.34
NEK3P51956 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NEK3P51956 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NEK3P51956 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
NEK3P51956 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.67□□□□□ -1.34
NEK3P51956 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.67□□□□□ -1.34
NEK3P51956 YWHAZP4-201ENST00000392459 708 ntBASIC6.67□□□□□ -1.34
NEK3P51956 AL034403.1-201ENST00000399414 885 ntBASIC6.67□□□□□ -1.34
NEK3P51956 AC099535.1-201ENST00000408928 371 ntBASIC6.67□□□□□ -1.34
NEK3P51956 RNA5SP115-201ENST00000411160 107 ntBASIC6.67□□□□□ -1.34
NEK3P51956 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.67□□□□□ -1.34
NEK3P51956 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.67□□□□□ -1.34
NEK3P51956 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.67□□□□□ -1.34
NEK3P51956 AL355355.1-201ENST00000442900 793 ntBASIC6.67□□□□□ -1.34
NEK3P51956 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.67□□□□□ -1.34
NEK3P51956 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.67□□□□□ -1.34
NEK3P51956 CCNJP1-201ENST00000450600 1149 ntBASIC6.67□□□□□ -1.34
NEK3P51956 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.67□□□□□ -1.34
NEK3P51956 RPL5P12-201ENST00000477071 851 ntBASIC6.67□□□□□ -1.34
NEK3P51956 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.67□□□□□ -1.34
NEK3P51956 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.67□□□□□ -1.34
NEK3P51956 TDGP1-201ENST00000543961 1229 ntBASIC6.67□□□□□ -1.34
NEK3P51956 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.67□□□□□ -1.34
NEK3P51956 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.67□□□□□ -1.34
NEK3P51956 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.67□□□□□ -1.34
NEK3P51956 AP003115.1-201ENST00000569849 463 ntBASIC6.67□□□□□ -1.34
NEK3P51956 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.67□□□□□ -1.34
NEK3P51956 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.67□□□□□ -1.34
NEK3P51956 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.67□□□□□ -1.34
NEK3P51956 AL157899.1-201ENST00000604110 936 ntBASIC6.67□□□□□ -1.34
NEK3P51956 AC135178.6-201ENST00000605314 398 ntBASIC6.67□□□□□ -1.34
NEK3P51956 AL450270.1-201ENST00000606160 391 ntBASIC6.67□□□□□ -1.34
NEK3P51956 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.67□□□□□ -1.34
NEK3P51956 MIR6780B-201ENST00000610307 79 ntBASIC6.67□□□□□ -1.34
NEK3P51956 AL645927.2-201ENST00000618350 349 ntBASIC6.67□□□□□ -1.34
NEK3P51956 AC089999.3-201ENST00000622440 577 ntBASIC6.67□□□□□ -1.34
NEK3P51956 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
NEK3P51956 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms