Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXA1P49639 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXA1P49639 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HOXA1P49639 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA1P49639 AC105235.1-201ENST00000623208 1816 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXA1P49639 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA1P49639 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA1P49639 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA1P49639 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA1P49639 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
HOXA1P49639 OR4G1P-202ENST00000641173 1788 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
HOXA1P49639 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXA1P49639 AC104260.2-201ENST00000623551 3497 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA1P49639 AP000568.1-201ENST00000282964 442 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA1P49639 RNA5SP431-201ENST00000410312 120 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 RN7SKP30-201ENST00000411373 334 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 RPL12P10-201ENST00000413498 498 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 AL158827.1-201ENST00000416300 391 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXA1P49639 RCC2P2-201ENST00000422174 918 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 AJ239321.1-201ENST00000424255 564 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXA1P49639 RPS10P21-201ENST00000430654 475 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXA1P49639 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXA1P49639 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXA1P49639 AC003989.1-201ENST00000434569 565 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXA1P49639 MTND2P25-201ENST00000449028 610 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXA1P49639 OR52Y1P-201ENST00000452418 828 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXA1P49639 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXA1P49639 AC079193.1-201ENST00000460497 588 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 TUBBP11-201ENST00000472255 252 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 AC022415.1-202ENST00000486612 523 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXA1P49639 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXA1P49639 GOLGA5P1-201ENST00000507317 980 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 AC008628.1-201ENST00000508663 265 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXA1P49639 RNU6-943P-201ENST00000516960 98 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA1P49639 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA1P49639 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.25□□□□□ -1.57
HOXA1P49639 PDCL3P1-201ENST00000534575 734 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 AC069240.2-201ENST00000550242 609 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXA1P49639 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXA1P49639 MIR4258-201ENST00000580920 91 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 AP005262.1-201ENST00000582646 997 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 AC233702.7-202ENST00000582941 211 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 MIR4660-201ENST00000583549 74 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.25□□□□□ -1.57
HOXA1P49639 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXA1P49639 AL391001.1-201ENST00000602747 715 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 DIMT1P1-201ENST00000603970 763 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 AC135803.1-201ENST00000608748 565 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXA1P49639 PTCHD3P1-201ENST00000612350 537 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 MRPL57P3-201ENST00000619218 176 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 AC005753.1-201ENST00000623837 618 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 AC021766.1-201ENST00000624404 741 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 AC114546.4-201ENST00000624413 369 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA1P49639 AL513548.1-201ENST00000562904 1724 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 GVINP1-202ENST00000531871 7271 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 SLC2A3P2-201ENST00000331747 1480 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.25□□□□□ -1.57
HOXA1P49639 AC138907.8-201ENST00000623981 2256 ntBASIC5.25□□□□□ -1.57
HOXA1P49639 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HOXA1P49639 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA1P49639 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXA1P49639 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA1P49639 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA1P49639 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA1P49639 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HOXA1P49639 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA1P49639 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXA1P49639 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA1P49639 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXA1P49639 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HOXA1P49639 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA1P49639 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXA1P49639 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
HOXA1P49639 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA1P49639 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HOXA1P49639 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA1P49639 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HOXA1P49639 RN7SKP74-201ENST00000362849 309 ntBASIC5.24□□□□□ -1.57
HOXA1P49639 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HOXA1P49639 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HOXA1P49639 OOSP1-201ENST00000398992 1270 ntBASIC5.24□□□□□ -1.57
HOXA1P49639 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXA1P49639 RN7SKP137-201ENST00000411074 307 ntBASIC5.24□□□□□ -1.57
HOXA1P49639 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms