Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.27□□□□□ -1.41
HTTP42858 POGK-202ENST00000367876 5754 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HTTP42858 ZZEF1-201ENST00000381638 11456 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HTTP42858 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HTTP42858 AC006213.6-201ENST00000623722 4179 ntBASIC6.26□□□□□ -1.41
HTTP42858 RNU6-398P-201ENST00000384143 109 ntBASIC6.26□□□□□ -1.41
HTTP42858 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.26□□□□□ -1.41
HTTP42858 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.26□□□□□ -1.41
HTTP42858 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.26□□□□□ -1.41
HTTP42858 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.26□□□□□ -1.41
HTTP42858 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.26□□□□□ -1.41
HTTP42858 AC093824.1-201ENST00000508796 343 ntBASIC6.26□□□□□ -1.41
HTTP42858 AL627230.1-201ENST00000613077 211 ntBASIC6.26□□□□□ -1.41
HTTP42858 AL591926.8-201ENST00000616876 211 ntBASIC6.26□□□□□ -1.41
HTTP42858 OR52H1-202ENST00000641796 1061 ntBASIC6.26□□□□□ -1.41
HTTP42858 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HTTP42858 LINC01963-201ENST00000562038 3148 ntBASIC6.26□□□□□ -1.41
HTTP42858 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HTTP42858 TOGARAM1-201ENST00000361462 6375 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HTTP42858 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.26□□□□□ -1.41
HTTP42858 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HTTP42858 LINC01616-201ENST00000561816 2280 ntBASIC6.26□□□□□ -1.41
HTTP42858 ZSCAN29-202ENST00000396976 5595 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HTTP42858 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.26□□□□□ -1.41
HTTP42858 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.26□□□□□ -1.41
HTTP42858 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.26□□□□□ -1.41
HTTP42858 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.26□□□□□ -1.41
HTTP42858 TRY2P-201ENST00000448860 689 ntBASIC6.26□□□□□ -1.41
HTTP42858 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.26□□□□□ -1.41
HTTP42858 OR7H2P-201ENST00000513483 306 ntBASIC6.26□□□□□ -1.41
HTTP42858 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.26□□□□□ -1.41
HTTP42858 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.26□□□□□ -1.41
HTTP42858 AC012414.7-202ENST00000622705 1090 ntBASIC6.26□□□□□ -1.41
HTTP42858 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
HTTP42858 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HTTP42858 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
HTTP42858 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HTTP42858 TACC2-212ENST00000453444 9158 ntTSL 5 BASIC6.26□□□□□ -1.41
HTTP42858 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HTTP42858 ZNF264-201ENST00000263095 12163 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
HTTP42858 AL034549.2-201ENST00000618285 3373 ntBASIC6.25□□□□□ -1.41
HTTP42858 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HTTP42858 AC004690.1-201ENST00000418216 328 ntBASIC6.25□□□□□ -1.41
HTTP42858 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HTTP42858 NDUFA12P1-201ENST00000455914 406 ntBASIC6.25□□□□□ -1.41
HTTP42858 RN7SL41P-201ENST00000476144 297 ntBASIC6.25□□□□□ -1.41
HTTP42858 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.25□□□□□ -1.41
HTTP42858 AC112694.2-201ENST00000623697 768 ntBASIC6.25□□□□□ -1.41
HTTP42858 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HTTP42858 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HTTP42858 EFR3B-204ENST00000403714 7434 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HTTP42858 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.25□□□□□ -1.41
HTTP42858 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.25□□□□□ -1.41
HTTP42858 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
HTTP42858 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.25□□□□□ -1.41
HTTP42858 MCM3AP-202ENST00000397708 6333 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HTTP42858 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HTTP42858 SNORA62-201ENST00000365493 153 ntBASIC6.25□□□□□ -1.41
HTTP42858 NPM1P40-201ENST00000412758 733 ntBASIC6.25□□□□□ -1.41
HTTP42858 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.25□□□□□ -1.41
HTTP42858 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.25□□□□□ -1.41
HTTP42858 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.25□□□□□ -1.41
HTTP42858 AC092647.2-201ENST00000452998 253 ntBASIC6.25□□□□□ -1.41
HTTP42858 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.25□□□□□ -1.41
HTTP42858 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.25□□□□□ -1.41
HTTP42858 MIR5095-201ENST00000578844 88 ntBASIC6.25□□□□□ -1.41
HTTP42858 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.25□□□□□ -1.41
HTTP42858 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.25□□□□□ -1.41
HTTP42858 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
HTTP42858 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
HTTP42858 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HTTP42858 MED12-203ENST00000374102 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HTTP42858 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.25□□□□□ -1.41
HTTP42858 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HTTP42858 KLHL3-201ENST00000309755 6806 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HTTP42858 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HTTP42858 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HTTP42858 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HTTP42858 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.25□□□□□ -1.41
HTTP42858 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.25□□□□□ -1.41
HTTP42858 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.25□□□□□ -1.41
HTTP42858 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.25□□□□□ -1.41
HTTP42858 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.25□□□□□ -1.41
HTTP42858 AC100784.1-201ENST00000522790 310 ntBASIC6.25□□□□□ -1.41
HTTP42858 AC244502.2-201ENST00000543361 851 ntBASIC6.25□□□□□ -1.41
HTTP42858 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HTTP42858 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.25□□□□□ -1.41
HTTP42858 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.25□□□□□ -1.41
HTTP42858 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HTTP42858 AC098850.4-201ENST00000448331 8802 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
HTTP42858 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC6.24□□□□□ -1.41
HTTP42858 AC130304.1-201ENST00000622942 2385 ntBASIC6.24□□□□□ -1.41
HTTP42858 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC6.24□□□□□ -1.41
HTTP42858 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC6.24□□□□□ -1.41
HTTP42858 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.24□□□□□ -1.41
HTTP42858 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HTTP42858 AC002075.1-201ENST00000457396 676 ntBASIC6.24□□□□□ -1.41
HTTP42858 RPS23P7-201ENST00000466210 444 ntBASIC6.24□□□□□ -1.41
HTTP42858 AC103987.1-201ENST00000473394 348 ntBASIC6.24□□□□□ -1.41
HTTP42858 INTS6P1-201ENST00000504674 2530 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms