Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.67□□□□□ -1.5
RFC3P40938 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFC3P40938 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFC3P40938 RNU1-134P-201ENST00000362935 165 ntBASIC5.67□□□□□ -1.5
RFC3P40938 RNU1-49P-201ENST00000363468 159 ntBASIC5.67□□□□□ -1.5
RFC3P40938 RNA5SP478-201ENST00000364657 115 ntBASIC5.67□□□□□ -1.5
RFC3P40938 RN7SKP269-201ENST00000365545 319 ntBASIC5.67□□□□□ -1.5
RFC3P40938 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RFC3P40938 LYPLA1P3-201ENST00000402650 695 ntBASIC5.67□□□□□ -1.5
RFC3P40938 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.67□□□□□ -1.5
RFC3P40938 AC097463.1-201ENST00000447288 481 ntBASIC5.67□□□□□ -1.5
RFC3P40938 AC092967.1-201ENST00000449016 481 ntBASIC5.67□□□□□ -1.5
RFC3P40938 VN1R38P-201ENST00000450265 887 ntBASIC5.67□□□□□ -1.5
RFC3P40938 AC092824.1-201ENST00000483524 576 ntBASIC5.67□□□□□ -1.5
RFC3P40938 UGT2A3P7-201ENST00000510485 734 ntBASIC5.67□□□□□ -1.5
RFC3P40938 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.67□□□□□ -1.5
RFC3P40938 KCTD9P4-201ENST00000526766 1166 ntBASIC5.67□□□□□ -1.5
RFC3P40938 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.67□□□□□ -1.5
RFC3P40938 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFC3P40938 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.67□□□□□ -1.5
RFC3P40938 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.67□□□□□ -1.5
RFC3P40938 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.67□□□□□ -1.5
RFC3P40938 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.67□□□□□ -1.5
RFC3P40938 AP001823.1-201ENST00000604056 1003 ntBASIC5.67□□□□□ -1.5
RFC3P40938 AL591167.1-201ENST00000607321 456 ntBASIC5.67□□□□□ -1.5
RFC3P40938 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.67□□□□□ -1.5
RFC3P40938 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.67□□□□□ -1.5
RFC3P40938 AC024255.1-201ENST00000614376 102 ntBASIC5.67□□□□□ -1.5
RFC3P40938 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.67□□□□□ -1.5
RFC3P40938 SNX18P12-201ENST00000624821 759 ntBASIC5.67□□□□□ -1.5
RFC3P40938 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.67□□□□□ -1.5
RFC3P40938 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFC3P40938 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.67□□□□□ -1.5
RFC3P40938 GUCY1B2-204ENST00000531898 1979 ntBASIC5.67□□□□□ -1.5
RFC3P40938 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFC3P40938 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFC3P40938 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFC3P40938 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RFC3P40938 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.67□□□□□ -1.5
RFC3P40938 NR1H5P-201ENST00000452683 1377 ntBASIC5.67□□□□□ -1.5
RFC3P40938 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFC3P40938 GTF2IP4-201ENST00000453092 2054 ntBASIC5.67□□□□□ -1.5
RFC3P40938 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RFC3P40938 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFC3P40938 DNM1P47-203ENST00000571780 12667 ntBASIC5.66□□□□□ -1.5
RFC3P40938 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFC3P40938 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFC3P40938 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.66□□□□□ -1.5
RFC3P40938 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFC3P40938 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFC3P40938 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFC3P40938 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RFC3P40938 RNA5SP188-201ENST00000362916 129 ntBASIC5.66□□□□□ -1.5
RFC3P40938 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
RFC3P40938 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RFC3P40938 U3.23-201ENST00000391132 200 ntBASIC5.66□□□□□ -1.5
RFC3P40938 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.66□□□□□ -1.5
RFC3P40938 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFC3P40938 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFC3P40938 RPS3P2-201ENST00000421346 701 ntBASIC5.66□□□□□ -1.5
RFC3P40938 PPIAP10-201ENST00000438675 458 ntBASIC5.66□□□□□ -1.5
RFC3P40938 BX679664.2-201ENST00000439282 283 ntBASIC5.66□□□□□ -1.5
RFC3P40938 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFC3P40938 PPIAP27-201ENST00000453800 265 ntBASIC5.66□□□□□ -1.5
RFC3P40938 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFC3P40938 RANP2-201ENST00000456833 229 ntBASIC5.66□□□□□ -1.5
RFC3P40938 AC010343.2-201ENST00000510162 224 ntBASIC5.66□□□□□ -1.5
RFC3P40938 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.66□□□□□ -1.5
RFC3P40938 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.66□□□□□ -1.5
RFC3P40938 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.66□□□□□ -1.5
RFC3P40938 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.66□□□□□ -1.5
RFC3P40938 AC021269.1-201ENST00000526860 705 ntBASIC5.66□□□□□ -1.5
RFC3P40938 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.66□□□□□ -1.5
RFC3P40938 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.66□□□□□ -1.5
RFC3P40938 AP001858.2-201ENST00000536213 601 ntBASIC5.66□□□□□ -1.5
RFC3P40938 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.66□□□□□ -1.5
RFC3P40938 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.66□□□□□ -1.5
RFC3P40938 AC092332.1-201ENST00000563684 829 ntBASIC5.66□□□□□ -1.5
RFC3P40938 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.66□□□□□ -1.5
RFC3P40938 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.66□□□□□ -1.5
RFC3P40938 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.66□□□□□ -1.5
RFC3P40938 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.66□□□□□ -1.5
RFC3P40938 AL034374.2-201ENST00000605281 548 ntBASIC5.66□□□□□ -1.5
RFC3P40938 AC006924.1-201ENST00000610750 559 ntBASIC5.66□□□□□ -1.5
RFC3P40938 AC004836.1-201ENST00000623032 634 ntBASIC5.66□□□□□ -1.5
RFC3P40938 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.66□□□□□ -1.5
RFC3P40938 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RFC3P40938 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFC3P40938 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFC3P40938 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RFC3P40938 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFC3P40938 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.66□□□□□ -1.5
RFC3P40938 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.66□□□□□ -1.5
RFC3P40938 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RFC3P40938 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RFC3P40938 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.66□□□□□ -1.5
RFC3P40938 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RFC3P40938 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.65□□□□□ -1.5
RFC3P40938 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.65□□□□□ -1.5
RFC3P40938 AC008627.1-201ENST00000517511 1704 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms