Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.13□□□□□ -1.27
BRCA1P38398 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.13□□□□□ -1.27
BRCA1P38398 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC7.13□□□□□ -1.27
BRCA1P38398 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC7.13□□□□□ -1.27
BRCA1P38398 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC7.13□□□□□ -1.27
BRCA1P38398 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
BRCA1P38398 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
BRCA1P38398 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
BRCA1P38398 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
BRCA1P38398 AL590004.4-201ENST00000566733 7060 ntBASIC7.13□□□□□ -1.27
BRCA1P38398 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
BRCA1P38398 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
BRCA1P38398 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.13□□□□□ -1.27
BRCA1P38398 RN7SKP104-201ENST00000362605 328 ntBASIC7.13□□□□□ -1.27
BRCA1P38398 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
BRCA1P38398 AC009804.1-201ENST00000400949 179 ntBASIC7.13□□□□□ -1.27
BRCA1P38398 GAPDHP42-201ENST00000406848 981 ntBASIC7.13□□□□□ -1.27
BRCA1P38398 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.13□□□□□ -1.27
BRCA1P38398 AP000547.1-201ENST00000454360 617 ntBASIC7.13□□□□□ -1.27
BRCA1P38398 AC004129.2-201ENST00000457229 287 ntBASIC7.13□□□□□ -1.27
BRCA1P38398 AC083982.1-201ENST00000485679 344 ntBASIC7.13□□□□□ -1.27
BRCA1P38398 RN7SL346P-201ENST00000491561 294 ntBASIC7.13□□□□□ -1.27
BRCA1P38398 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC7.13□□□□□ -1.27
BRCA1P38398 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC7.13□□□□□ -1.27
BRCA1P38398 RN7SKP288-201ENST00000516227 268 ntBASIC7.13□□□□□ -1.27
BRCA1P38398 SCARNA6.1-201ENST00000516989 238 ntBASIC7.13□□□□□ -1.27
BRCA1P38398 AC139365.2-201ENST00000517972 253 ntBASIC7.13□□□□□ -1.27
BRCA1P38398 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.13□□□□□ -1.27
BRCA1P38398 MIR4480-201ENST00000582492 71 ntBASIC7.13□□□□□ -1.27
BRCA1P38398 AC012616.1-201ENST00000600294 197 ntBASIC7.13□□□□□ -1.27
BRCA1P38398 AF230666.2-201ENST00000602328 725 ntBASIC7.13□□□□□ -1.27
BRCA1P38398 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
BRCA1P38398 AC079753.1-201ENST00000623243 3868 ntBASIC7.13□□□□□ -1.27
BRCA1P38398 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.13□□□□□ -1.27
BRCA1P38398 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.13□□□□□ -1.27
BRCA1P38398 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
BRCA1P38398 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
BRCA1P38398 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
BRCA1P38398 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
BRCA1P38398 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
BRCA1P38398 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
BRCA1P38398 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
BRCA1P38398 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
BRCA1P38398 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
BRCA1P38398 AC013442.1-201ENST00000397347 228 ntBASIC7.12□□□□□ -1.27
BRCA1P38398 RN7SKP279-201ENST00000411383 298 ntBASIC7.12□□□□□ -1.27
BRCA1P38398 RAB28P2-201ENST00000454299 641 ntBASIC7.12□□□□□ -1.27
BRCA1P38398 AL389915.2-201ENST00000454576 441 ntBASIC7.12□□□□□ -1.27
BRCA1P38398 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.12□□□□□ -1.27
BRCA1P38398 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.12□□□□□ -1.27
BRCA1P38398 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.12□□□□□ -1.27
BRCA1P38398 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
BRCA1P38398 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.12□□□□□ -1.27
BRCA1P38398 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.12□□□□□ -1.27
BRCA1P38398 AC116631.1-202ENST00000640984 683 ntBASIC7.12□□□□□ -1.27
BRCA1P38398 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC7.12□□□□□ -1.27
BRCA1P38398 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.12□□□□□ -1.27
BRCA1P38398 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
BRCA1P38398 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC7.12□□□□□ -1.27
BRCA1P38398 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
BRCA1P38398 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
BRCA1P38398 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
BRCA1P38398 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
BRCA1P38398 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
BRCA1P38398 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
BRCA1P38398 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
BRCA1P38398 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.12□□□□□ -1.27
BRCA1P38398 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
BRCA1P38398 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
BRCA1P38398 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
BRCA1P38398 GNAS-202ENST00000306090 477 ntTSL 5 BASIC7.11□□□□□ -1.27
BRCA1P38398 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
BRCA1P38398 AL390774.1-201ENST00000411924 246 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 AL357752.1-201ENST00000412817 349 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 CEACAMP7-201ENST00000444105 496 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 RPS29P22-201ENST00000472363 168 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 RPL7P39-201ENST00000481157 744 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 AC007686.1-201ENST00000488511 463 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 ST13P12-201ENST00000508958 1094 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.11□□□□□ -1.27
BRCA1P38398 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC7.11□□□□□ -1.27
BRCA1P38398 AC015720.2-201ENST00000567709 334 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
BRCA1P38398 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC7.11□□□□□ -1.27
BRCA1P38398 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
BRCA1P38398 HSPA8P18-201ENST00000439846 1928 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
BRCA1P38398 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.11□□□□□ -1.27
BRCA1P38398 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
BRCA1P38398 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.11□□□□□ -1.27
BRCA1P38398 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.11□□□□□ -1.27
BRCA1P38398 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
BRCA1P38398 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
BRCA1P38398 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
BRCA1P38398 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
BRCA1P38398 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
BRCA1P38398 RPS6P23-201ENST00000413224 722 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 AC019205.1-201ENST00000421830 730 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 AC097721.1-201ENST00000427150 1253 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms