Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
VAMP1P23763 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VAMP1P23763 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VAMP1P23763 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VAMP1P23763 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VAMP1P23763 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
VAMP1P23763 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VAMP1P23763 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VAMP1P23763 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VAMP1P23763 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
VAMP1P23763 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VAMP1P23763 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VAMP1P23763 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
VAMP1P23763 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
VAMP1P23763 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
VAMP1P23763 MYL12A-201ENST00000217652 1229 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VAMP1P23763 OR51A10P-201ENST00000307165 937 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VAMP1P23763 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC6.65□□□□□ -1.34
VAMP1P23763 RN7SKP204-201ENST00000365481 310 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.65□□□□□ -1.34
VAMP1P23763 MIR506-201ENST00000384998 124 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
VAMP1P23763 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
VAMP1P23763 RPL23AP29-201ENST00000397284 453 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 SNRPEP2-201ENST00000397592 279 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VAMP1P23763 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.65□□□□□ -1.34
VAMP1P23763 FABP12P1-201ENST00000401911 322 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 PGBD4P8-201ENST00000412993 562 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 MTCO3P41-201ENST00000414801 328 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 AL160153.1-201ENST00000415285 429 ntTSL 3 BASIC6.65□□□□□ -1.34
VAMP1P23763 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.65□□□□□ -1.34
VAMP1P23763 LINC00993-201ENST00000420453 540 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 NIPA2P1-201ENST00000426223 976 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 AC006450.2-201ENST00000429482 581 ntTSL 2 BASIC6.65□□□□□ -1.34
VAMP1P23763 LINC00892-202ENST00000429841 529 ntTSL 2 BASIC6.65□□□□□ -1.34
VAMP1P23763 PYHIN5P-201ENST00000431627 723 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 BMS1P19-201ENST00000433925 393 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 B3GNT2P1-201ENST00000434960 952 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC6.65□□□□□ -1.34
VAMP1P23763 MIR4435-2HG-208ENST00000439494 707 ntTSL 5 BASIC6.65□□□□□ -1.34
VAMP1P23763 MTND2P20-201ENST00000440805 661 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC6.65□□□□□ -1.34
VAMP1P23763 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.65□□□□□ -1.34
VAMP1P23763 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC6.65□□□□□ -1.34
VAMP1P23763 FAR2P3-205ENST00000447059 604 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 AC073909.1-201ENST00000447112 999 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 MTCO1P48-201ENST00000448024 1096 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC6.65□□□□□ -1.34
VAMP1P23763 AL392003.2-201ENST00000451015 679 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 SLC31A1P1-201ENST00000451221 567 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 AL645937.3-201ENST00000453647 936 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 RPL18AP17-201ENST00000455326 198 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC6.65□□□□□ -1.34
VAMP1P23763 RPS27P12-201ENST00000464146 258 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 PPIAP21-201ENST00000464473 501 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 RPL12P6-201ENST00000495231 498 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 PDCD10-218ENST00000497056 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
VAMP1P23763 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
VAMP1P23763 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
VAMP1P23763 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.65□□□□□ -1.34
VAMP1P23763 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.65□□□□□ -1.34
VAMP1P23763 AC073848.1-201ENST00000514339 457 ntTSL 3 BASIC6.65□□□□□ -1.34
VAMP1P23763 RNU6-583P-201ENST00000516012 92 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.65□□□□□ -1.34
VAMP1P23763 AC103409.1-202ENST00000518416 577 ntTSL 4 BASIC6.65□□□□□ -1.34
VAMP1P23763 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.65□□□□□ -1.34
VAMP1P23763 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.65□□□□□ -1.34
VAMP1P23763 PTTG3P-201ENST00000521862 606 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 NDUFC2-202ENST00000525085 495 ntTSL 3 BASIC6.65□□□□□ -1.34
VAMP1P23763 AP003033.1-201ENST00000527244 415 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 AC090502.2-201ENST00000549267 280 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.65□□□□□ -1.34
VAMP1P23763 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.65□□□□□ -1.34
VAMP1P23763 PCED1B-AS1-209ENST00000552269 673 ntTSL 2 BASIC6.65□□□□□ -1.34
VAMP1P23763 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.65□□□□□ -1.34
VAMP1P23763 AC244034.2-201ENST00000562504 509 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 AC011260.1-201ENST00000578420 472 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 MIR3125-201ENST00000579927 78 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 MIR3611-201ENST00000584484 83 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC6.65□□□□□ -1.34
VAMP1P23763 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC6.65□□□□□ -1.34
VAMP1P23763 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.65□□□□□ -1.34
VAMP1P23763 HMGN2P46-208ENST00000598619 490 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 AL590705.1-201ENST00000607322 484 ntTSL 4 BASIC6.65□□□□□ -1.34
VAMP1P23763 U3.50-201ENST00000611947 228 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 AC116447.1-201ENST00000613153 453 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 MIR7844-201ENST00000616161 122 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 AC011472.5-201ENST00000624079 508 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 AC006927.3-201ENST00000638789 384 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 FAM238C-205ENST00000640641 391 ntBASIC6.65□□□□□ -1.34
VAMP1P23763 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.65□□□□□ -1.35
VAMP1P23763 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC6.65□□□□□ -1.35
VAMP1P23763 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
VAMP1P23763 EEF1A1P6-201ENST00000434005 1384 ntBASIC6.65□□□□□ -1.35
VAMP1P23763 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC6.65□□□□□ -1.35
VAMP1P23763 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.65□□□□□ -1.35
VAMP1P23763 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms