Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.68□□□□□ -1.34
COL11A1P12107 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.68□□□□□ -1.34
COL11A1P12107 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.68□□□□□ -1.34
COL11A1P12107 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL11A1P12107 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL11A1P12107 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL11A1P12107 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL11A1P12107 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.68□□□□□ -1.34
COL11A1P12107 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL11A1P12107 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL11A1P12107 AC006511.3-201ENST00000624929 1783 ntBASIC6.68□□□□□ -1.34
COL11A1P12107 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.68□□□□□ -1.34
COL11A1P12107 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL11A1P12107 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.68□□□□□ -1.34
COL11A1P12107 AC023141.8-201ENST00000442554 208 ntBASIC6.68□□□□□ -1.34
COL11A1P12107 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.68□□□□□ -1.34
COL11A1P12107 AC022215.1-201ENST00000481770 362 ntBASIC6.68□□□□□ -1.34
COL11A1P12107 ATP5LP3-201ENST00000514223 304 ntBASIC6.68□□□□□ -1.34
COL11A1P12107 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.68□□□□□ -1.34
COL11A1P12107 AC090651.1-201ENST00000567865 634 ntBASIC6.68□□□□□ -1.34
COL11A1P12107 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.68□□□□□ -1.34
COL11A1P12107 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL11A1P12107 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.68□□□□□ -1.34
COL11A1P12107 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.68□□□□□ -1.34
COL11A1P12107 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
COL11A1P12107 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
COL11A1P12107 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL11A1P12107 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL11A1P12107 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.68□□□□□ -1.34
COL11A1P12107 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL11A1P12107 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL11A1P12107 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.67□□□□□ -1.34
COL11A1P12107 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.67□□□□□ -1.34
COL11A1P12107 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL11A1P12107 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL11A1P12107 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL11A1P12107 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL11A1P12107 TMA16P2-201ENST00000413187 601 ntBASIC6.67□□□□□ -1.34
COL11A1P12107 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.67□□□□□ -1.34
COL11A1P12107 AL121776.1-201ENST00000429337 372 ntBASIC6.67□□□□□ -1.34
COL11A1P12107 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.67□□□□□ -1.34
COL11A1P12107 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.67□□□□□ -1.34
COL11A1P12107 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.67□□□□□ -1.34
COL11A1P12107 MYO5BP2-201ENST00000449815 1277 ntBASIC6.67□□□□□ -1.34
COL11A1P12107 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.67□□□□□ -1.34
COL11A1P12107 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.67□□□□□ -1.34
COL11A1P12107 AC139365.2-201ENST00000517972 253 ntBASIC6.67□□□□□ -1.34
COL11A1P12107 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.67□□□□□ -1.34
COL11A1P12107 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.67□□□□□ -1.34
COL11A1P12107 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.67□□□□□ -1.34
COL11A1P12107 IGBP1P1-201ENST00000554337 1009 ntBASIC6.67□□□□□ -1.34
COL11A1P12107 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.67□□□□□ -1.34
COL11A1P12107 AP001496.3-201ENST00000580230 913 ntBASIC6.67□□□□□ -1.34
COL11A1P12107 MIR4311-201ENST00000580794 100 ntBASIC6.67□□□□□ -1.34
COL11A1P12107 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.67□□□□□ -1.34
COL11A1P12107 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.67□□□□□ -1.34
COL11A1P12107 IMMP1LP3-201ENST00000604197 224 ntBASIC6.67□□□□□ -1.34
COL11A1P12107 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.67□□□□□ -1.34
COL11A1P12107 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
COL11A1P12107 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL11A1P12107 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL11A1P12107 GTF2IP4-201ENST00000453092 2054 ntBASIC6.67□□□□□ -1.34
COL11A1P12107 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
COL11A1P12107 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
COL11A1P12107 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
COL11A1P12107 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL11A1P12107 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL11A1P12107 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL11A1P12107 MFSD8-219ENST00000641228 2559 ntBASIC6.67□□□□□ -1.34
COL11A1P12107 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
COL11A1P12107 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL11A1P12107 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.67□□□□□ -1.34
COL11A1P12107 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COL11A1P12107 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COL11A1P12107 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.66□□□□□ -1.34
COL11A1P12107 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL11A1P12107 AL133173.1-201ENST00000423458 397 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 NANOGP4-201ENST00000427230 913 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 AC019185.1-201ENST00000442718 389 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 AL133445.1-201ENST00000467051 452 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 AC009120.1-201ENST00000493458 473 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.66□□□□□ -1.34
COL11A1P12107 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.66□□□□□ -1.34
COL11A1P12107 CYP4F27P-201ENST00000514557 494 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 RN7SKP98-201ENST00000517070 156 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.66□□□□□ -1.34
COL11A1P12107 HSPE1P2-201ENST00000554777 306 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.66□□□□□ -1.34
COL11A1P12107 AC008536.1-201ENST00000602872 669 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 CYCSP1-201ENST00000604815 315 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 AL139099.4-201ENST00000614802 114 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.66□□□□□ -1.34
COL11A1P12107 AL691477.1-201ENST00000624398 162 ntBASIC6.66□□□□□ -1.34
COL11A1P12107 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.66□□□□□ -1.34
COL11A1P12107 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.66□□□□□ -1.34
COL11A1P12107 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.66□□□□□ -1.34
COL11A1P12107 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
COL11A1P12107 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COL11A1P12107 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms