Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MIR6811-201ENST00000620409 58 ntBASIC6.61□□□□□ -1.35
TPM1P09493 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM1P09493 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.61□□□□□ -1.35
TPM1P09493 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
TPM1P09493 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM1P09493 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.61□□□□□ -1.35
TPM1P09493 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
TPM1P09493 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM1P09493 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TPM1P09493 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM1P09493 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.61□□□□□ -1.35
TPM1P09493 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.61□□□□□ -1.35
TPM1P09493 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.61□□□□□ -1.35
TPM1P09493 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TPM1P09493 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.61□□□□□ -1.35
TPM1P09493 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TPM1P09493 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
TPM1P09493 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TPM1P09493 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
TPM1P09493 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
TPM1P09493 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TPM1P09493 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TPM1P09493 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TPM1P09493 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
TPM1P09493 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
TPM1P09493 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.6□□□□□ -1.35
TPM1P09493 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TPM1P09493 RNA5SP485-201ENST00000365053 119 ntBASIC6.6□□□□□ -1.35
TPM1P09493 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.6□□□□□ -1.35
TPM1P09493 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
TPM1P09493 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
TPM1P09493 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.6□□□□□ -1.35
TPM1P09493 RN7SKP144-201ENST00000411108 279 ntBASIC6.6□□□□□ -1.35
TPM1P09493 AP003385.1-201ENST00000426387 893 ntBASIC6.6□□□□□ -1.35
TPM1P09493 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TPM1P09493 NPM1P18-201ENST00000434232 732 ntBASIC6.6□□□□□ -1.35
TPM1P09493 OR3D1P-201ENST00000438288 955 ntBASIC6.6□□□□□ -1.35
TPM1P09493 GAPDHP37-201ENST00000442317 968 ntBASIC6.6□□□□□ -1.35
TPM1P09493 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.6□□□□□ -1.35
TPM1P09493 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.6□□□□□ -1.35
TPM1P09493 EIF3LP2-201ENST00000457262 807 ntBASIC6.6□□□□□ -1.35
TPM1P09493 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.6□□□□□ -1.35
TPM1P09493 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.6□□□□□ -1.35
TPM1P09493 GM2AP2-201ENST00000491764 562 ntBASIC6.6□□□□□ -1.35
TPM1P09493 AC009567.2-201ENST00000502989 349 ntBASIC6.6□□□□□ -1.35
TPM1P09493 GLUD1P3-202ENST00000508551 200 ntBASIC6.6□□□□□ -1.35
TPM1P09493 AC093664.1-201ENST00000511779 289 ntBASIC6.6□□□□□ -1.35
TPM1P09493 RN7SKP64-201ENST00000517206 328 ntBASIC6.6□□□□□ -1.35
TPM1P09493 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
TPM1P09493 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.6□□□□□ -1.35
TPM1P09493 AC100832.2-201ENST00000582080 776 ntBASIC6.6□□□□□ -1.35
TPM1P09493 AC010487.1-201ENST00000594408 1172 ntBASIC6.6□□□□□ -1.35
TPM1P09493 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.6□□□□□ -1.35
TPM1P09493 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
TPM1P09493 AC099654.15-201ENST00000639802 509 ntBASIC6.6□□□□□ -1.35
TPM1P09493 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
TPM1P09493 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.6□□□□□ -1.35
TPM1P09493 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.6□□□□□ -1.35
TPM1P09493 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
TPM1P09493 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TPM1P09493 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TPM1P09493 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.6□□□□□ -1.35
TPM1P09493 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TPM1P09493 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TPM1P09493 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TPM1P09493 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.59□□□□□ -1.35
TPM1P09493 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TPM1P09493 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TPM1P09493 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM1P09493 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM1P09493 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
TPM1P09493 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TPM1P09493 AL080312.1-201ENST00000256654 824 ntBASIC6.59□□□□□ -1.35
TPM1P09493 RNA5SP346-201ENST00000363541 121 ntBASIC6.59□□□□□ -1.35
TPM1P09493 RPL11P3-201ENST00000395256 523 ntBASIC6.59□□□□□ -1.35
TPM1P09493 VIM2P-201ENST00000402383 1294 ntBASIC6.59□□□□□ -1.35
TPM1P09493 AC245096.1-201ENST00000413104 546 ntBASIC6.59□□□□□ -1.35
TPM1P09493 DHFRP2-201ENST00000414224 547 ntBASIC6.59□□□□□ -1.35
TPM1P09493 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.59□□□□□ -1.35
TPM1P09493 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
TPM1P09493 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TPM1P09493 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM1P09493 NREP-217ENST00000509025 987 ntTSL 3 BASIC6.59□□□□□ -1.35
TPM1P09493 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.59□□□□□ -1.35
TPM1P09493 OR56A7P-201ENST00000524865 941 ntBASIC6.59□□□□□ -1.35
TPM1P09493 OR9G2P-201ENST00000533326 880 ntBASIC6.59□□□□□ -1.35
TPM1P09493 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.59□□□□□ -1.35
TPM1P09493 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.59□□□□□ -1.35
TPM1P09493 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM1P09493 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM1P09493 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM1P09493 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
TPM1P09493 AC009962.1-201ENST00000567327 3813 ntBASIC6.59□□□□□ -1.35
TPM1P09493 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM1P09493 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.59□□□□□ -1.35
TPM1P09493 AC026898.1-201ENST00000586404 571 ntBASIC6.59□□□□□ -1.35
TPM1P09493 AC006115.2-201ENST00000596823 202 ntBASIC6.59□□□□□ -1.35
TPM1P09493 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM1P09493 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.59□□□□□ -1.35
TPM1P09493 AC023206.1-201ENST00000605824 298 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms