Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CNOT4O95628 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 AC018688.1-201ENST00000636528 1754 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.36□□□□□ -1.39
CNOT4O95628 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.36□□□□□ -1.39
CNOT4O95628 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.36□□□□□ -1.39
CNOT4O95628 MFSD8-217ENST00000641178 4374 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 AC132219.2-201ENST00000624416 2327 ntBASIC6.36□□□□□ -1.39
CNOT4O95628 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CNOT4O95628 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CNOT4O95628 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
CNOT4O95628 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 AC007342.5-201ENST00000571340 2142 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CNOT4O95628 RNU6-207P-201ENST00000384137 107 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CNOT4O95628 FABP12P1-201ENST00000401911 322 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.35□□□□□ -1.39
CNOT4O95628 RN7SKP221-201ENST00000410420 301 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 Y_RNA.619-201ENST00000410951 90 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.35□□□□□ -1.39
CNOT4O95628 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.35□□□□□ -1.39
CNOT4O95628 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.35□□□□□ -1.39
CNOT4O95628 TIMM9P2-201ENST00000419324 266 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC6.35□□□□□ -1.39
CNOT4O95628 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.35□□□□□ -1.39
CNOT4O95628 AC093422.3-201ENST00000428506 305 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.35□□□□□ -1.39
CNOT4O95628 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 AL356121.1-201ENST00000442911 156 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 SRP68P2-201ENST00000456184 254 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 ATG12P2-201ENST00000456830 416 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 MTND4LP3-201ENST00000468320 276 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.35□□□□□ -1.39
CNOT4O95628 RPS4XP17-201ENST00000479057 754 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 RPL10P7-201ENST00000495649 625 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.35□□□□□ -1.39
CNOT4O95628 AC010374.1-201ENST00000503762 1237 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC6.35□□□□□ -1.39
CNOT4O95628 NACAP6-201ENST00000509572 622 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 HMGB1P46-201ENST00000520062 610 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.35□□□□□ -1.39
CNOT4O95628 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.35□□□□□ -1.39
CNOT4O95628 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 AC084824.1-201ENST00000550917 1005 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 AC090971.3-201ENST00000557871 1041 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 MT1B-202ENST00000562399 351 ntTSL 3 BASIC6.35□□□□□ -1.39
CNOT4O95628 AC103987.3-201ENST00000582071 292 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 AC092960.1-201ENST00000604762 351 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 PART1_2.1-201ENST00000612397 250 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6.35□□□□□ -1.39
CNOT4O95628 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC6.35□□□□□ -1.39
CNOT4O95628 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 FRG1DP-201ENST00000635586 771 ntBASIC6.35□□□□□ -1.39
CNOT4O95628 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CNOT4O95628 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CNOT4O95628 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.35□□□□□ -1.39
CNOT4O95628 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNOT4O95628 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CNOT4O95628 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.34□□□□□ -1.39
CNOT4O95628 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.34□□□□□ -1.39
CNOT4O95628 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNOT4O95628 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC6.34□□□□□ -1.39
CNOT4O95628 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.34□□□□□ -1.39
CNOT4O95628 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms