Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC040958.1-201ENST00000561102 201 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 RN7SL290P-201ENST00000578661 300 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 MIR378C-201ENST00000578683 81 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1BO75841 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1BO75841 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
UPK1BO75841 AC026468.1-201ENST00000614981 107 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
UPK1BO75841 AC091932.2-201ENST00000623014 291 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
UPK1BO75841 AC090220.1-201ENST00000593078 1699 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.08□□□□□ -1.6
UPK1BO75841 AC026523.2-201ENST00000625039 7739 ntBASIC5.08□□□□□ -1.6
UPK1BO75841 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
UPK1BO75841 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1BO75841 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1BO75841 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1BO75841 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
UPK1BO75841 AC104964.3-201ENST00000606115 2860 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 AC093591.2-201ENST00000565254 3843 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1BO75841 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1BO75841 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1BO75841 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.07□□□□□ -1.6
UPK1BO75841 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.07□□□□□ -1.6
UPK1BO75841 SLC9B1P3-201ENST00000452667 1334 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.07□□□□□ -1.6
UPK1BO75841 AC000374.1-201ENST00000434698 1745 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 OR10R3P-201ENST00000361688 942 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 RN7SKP121-201ENST00000410842 305 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 RN7SKP97-201ENST00000410966 333 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 IFNA12P-201ENST00000413147 571 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 RPS15AP30-201ENST00000420976 390 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 AC083862.1-201ENST00000427378 1242 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.07□□□□□ -1.6
UPK1BO75841 RPL34P6-201ENST00000432390 345 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 RN7SL213P-201ENST00000463482 317 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 RN7SL228P-201ENST00000470060 303 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1BO75841 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.07□□□□□ -1.6
UPK1BO75841 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.07□□□□□ -1.6
UPK1BO75841 ADI1P2-201ENST00000514945 429 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 GTF2IP11-201ENST00000526931 420 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.07□□□□□ -1.6
UPK1BO75841 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC5.07□□□□□ -1.6
UPK1BO75841 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC5.07□□□□□ -1.6
UPK1BO75841 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.07□□□□□ -1.6
UPK1BO75841 AC006272.2-201ENST00000594725 163 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.07□□□□□ -1.6
UPK1BO75841 AC019322.2-201ENST00000605634 147 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC5.07□□□□□ -1.6
UPK1BO75841 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC5.07□□□□□ -1.6
UPK1BO75841 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1BO75841 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1BO75841 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.07□□□□□ -1.6
UPK1BO75841 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1BO75841 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
UPK1BO75841 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
UPK1BO75841 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
UPK1BO75841 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.07□□□□□ -1.6
UPK1BO75841 MFSD8-219ENST00000641228 2559 ntBASIC5.07□□□□□ -1.6
UPK1BO75841 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
UPK1BO75841 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1BO75841 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1BO75841 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.06□□□□□ -1.6
UPK1BO75841 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC5.06□□□□□ -1.6
UPK1BO75841 HSPD1P7-201ENST00000447985 1686 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 FBXL21-201ENST00000297158 1305 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
UPK1BO75841 PCAT14-202ENST00000627127 3935 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1BO75841 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1BO75841 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1BO75841 RNU105B-201ENST00000364478 208 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 RN7SKP130-201ENST00000364924 301 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
UPK1BO75841 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
UPK1BO75841 RN7SKP168-201ENST00000410910 300 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 COX5BP7-201ENST00000414780 274 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.06□□□□□ -1.6
UPK1BO75841 PPIL1P1-201ENST00000423936 499 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.06□□□□□ -1.6
UPK1BO75841 VDAC2P3-201ENST00000430995 828 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 AC027124.1-201ENST00000440852 466 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.06□□□□□ -1.6
UPK1BO75841 AC004129.2-201ENST00000457229 287 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.06□□□□□ -1.6
UPK1BO75841 SNORA35.1-201ENST00000458908 128 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 AC117382.1-201ENST00000468074 730 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.06□□□□□ -1.6
UPK1BO75841 RN7SL369P-201ENST00000477138 299 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 SCARNA11.1-201ENST00000516918 132 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 Y_RNA.710-201ENST00000516975 110 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 AC021733.2-201ENST00000518830 497 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.06□□□□□ -1.6
UPK1BO75841 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.06□□□□□ -1.6
UPK1BO75841 RBMS2P1-201ENST00000525031 1226 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 AC079064.1-201ENST00000528365 362 ntBASIC5.06□□□□□ -1.6
UPK1BO75841 AC137627.1-201ENST00000545761 289 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms